RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 TNNQ9UQP3 1299 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 LAMB2P55268 1798 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 CARMIL3Q8ND23 1372 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 ERICH4A6NGS2 130 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 NFIXQ14938 502 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 PARP10Q53GL7 1025 aa11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-207ENST00000503974 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 TSGA10IPQ3SY00 556 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 INTS3Q68E01 1043 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 ARMCX6Q7L4S7 300 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 MYD88Q99836 296 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 CTNNA3Q9UI47 895 aa11.41□□□□□ -0.58
PDLIM5-207ENST00000503974 NEURL1BA8MQ27 555 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 POLRMTO00411 1230 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 COQ9O75208 318 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 DDR1Q08345 913 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 PDE3AQ14432 1141 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 HSP90AB4PQ58FF6 505 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 NLRP10Q86W26 655 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 DZIP1LQ8IYY4 767 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 NIP7Q9Y221 180 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 JRKLQ9Y4A0 524 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 RIC1Q4ADV7 1423 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 KIF13BQ9NQT8 1826 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 CCT4P50991 539 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 GYS2P54840 703 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
PDLIM5-207ENST00000503974 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.59
PDLIM5-207ENST00000503974 PLIN1O60240 522 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 NTSR2O95665 410 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 RLBP1P12271 317 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 TRDNQ13061 729 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 CWF19L2Q2TBE0 894 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 SRCIN1Q9C0H9 1055 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 UTYO14607 1347 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 LRP5O75197 1615 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 ZBTB7AO95365 584 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 GPTP24298 496 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 CYP2C19P33261 490 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 C1QTNF12Q5T7M4 302 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 MKL1Q969V6 931 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 SETDB2Q96T68 719 aa11.39□□□□□ -0.59
PDLIM5-207ENST00000503974 ANKRD31Q8N7Z5 1873 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 FAM177BA6PVY3 158 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 MMP10P09238 476 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 ATP2B1P20020 1258 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 PTGER2P43116 358 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 GCKRQ14397 625 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 TMEM57Q8N5G2 664 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 PAIP2Q9BPZ3 127 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 CWC25Q9NXE8 425 aaPredicted RBP11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-207ENST00000503974 C10orf71Q711Q0 1435 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 ANKRD33BA6NCL7 494 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 CTAGE5O15320 804 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 REC8O95072 547 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 KIAA2012Q0VF49 1180 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 MAP9Q49MG5 647 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 BICDL1Q6ZP65 573 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 PPP1R42Q7Z4L9 355 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 TSPAN18Q96SJ8 248 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 TBC1D2Q9BYX2 928 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 CDHR2Q9BYE9 1310 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 GOLGA6L6A8MZA4 724 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 H7C1W4 665 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 CTIFO43310 598 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 SERPINB2P05120 415 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 PCCAP05165 728 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 LIG1P18858 919 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 CASP7P55210 303 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 SETDB1Q15047 1291 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 PANK1Q8TE04 598 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 NYXQ9GZU5 481 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 PAXBP1Q9Y5B6 917 aa11.37□□□□□ -0.59
PDLIM5-207ENST00000503974 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 INHBEP58166 350 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 MVPQ14764 893 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 MUM1L1Q5H9M0 696 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 PRR5LQ6MZQ0 368 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 MYH3P11055 1940 aa11.36□□□□□ -0.59
PDLIM5-207ENST00000503974 ABCC12Q96J65 1359 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms