RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 BICDL1Q6ZP65 573 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 BTLAQ7Z6A9 289 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 NLRP8Q86W28 1048 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 ZNF280CQ8ND82 737 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 HSH2DQ96JZ2 352 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 ZCCHC2Q9C0B9 1178 aaKnown RBP6.88□□□□□ -1.31
SMN2-204ENST00000503678 NEUROD4Q9HD90 331 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
SMN2-204ENST00000503678 KLF15Q9UIH9 416 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
SMN2-204ENST00000503678 RTCBQ9Y3I0 505 aaKnown RBP6.88□□□□□ -1.31
SMN2-204ENST00000503678 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
SMN2-204ENST00000503678 SPDYE3A6NKU9 549 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 UBAP1LF5GYI3 381 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 PHACTR2O75167 634 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 EPB42P16452 691 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 ATP4AP20648 1035 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 ST13P50502 369 aaKnown RBP6.87□□□□□ -1.31
SMN2-204ENST00000503678 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
SMN2-204ENST00000503678 TRIP4Q15650 581 aaPredicted RBP6.87□□□□□ -1.31
SMN2-204ENST00000503678 USPL1Q5W0Q7 1092 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
SMN2-204ENST00000503678 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 C11orf16Q9NQ32 467 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
SMN2-204ENST00000503678 A0A1W2PNR3 127 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 DCDC2BA2VCK2 349 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 SMARCA5O60264 1052 aaPredicted RBP6.86□□□□□ -1.31
SMN2-204ENST00000503678 TNNI2P48788 182 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 RACK1P63244 317 aaKnown RBP6.86□□□□□ -1.31
SMN2-204ENST00000503678 ARID5AQ03989 594 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 ZNF394Q53GI3 561 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 CMTR1Q8N1G2 835 aaKnown RBP6.86□□□□□ -1.31
SMN2-204ENST00000503678 SRA1Q9HD15 236 aaKnown RBP6.86□□□□□ -1.31
SMN2-204ENST00000503678 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
SMN2-204ENST00000503678 KHNYNO15037 678 aaKnown RBP6.85□□□□□ -1.31
SMN2-204ENST00000503678 DNAJA1P31689 397 aaKnown RBP6.85□□□□□ -1.31
SMN2-204ENST00000503678 LRP8Q14114 963 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 PRRT3Q5FWE3 981 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 ZIC5Q96T25 663 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 GGT7Q9UJ14 662 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 PCDHGB7Q9Y5F8 929 aa6.85□□□□□ -1.31
SMN2-204ENST00000503678 APBA3O96018 575 aa6.84□□□□□ -1.31
SMN2-204ENST00000503678 EGFRP00533 1210 aa6.84□□□□□ -1.31
SMN2-204ENST00000503678 MAPTP10636 758 aaKnown RBP6.84□□□□□ -1.31
SMN2-204ENST00000503678 GALNT12Q8IXK2 581 aa6.84□□□□□ -1.31
SMN2-204ENST00000503678 DHX38Q92620 1227 aaKnown RBP6.84□□□□□ -1.31
SMN2-204ENST00000503678 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
SMN2-204ENST00000503678 TMEM63CQ9P1W3 806 aa6.84□□□□□ -1.31
SMN2-204ENST00000503678 USP20Q9Y2K6 914 aa6.84□□□□□ -1.31
SMN2-204ENST00000503678 HYAL3O43820 417 aaPredicted RBP6.83□□□□□ -1.32
SMN2-204ENST00000503678 USP17L7P0C7H9 530 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 CD33P20138 364 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 GTF2F1P35269 517 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMN2-204ENST00000503678 TNP2Q05952 138 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 TYRO3Q06418 890 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 MEI1Q5TIA1 1274 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 LRRC69Q6ZNQ3 347 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 NOP9Q86U38 636 aaKnown RBP6.83□□□□□ -1.32
SMN2-204ENST00000503678 BCO2Q9BYV7 579 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 LNPKQ9C0E8 428 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 CHRDQ9H2X0 955 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 NPHS2Q9NP85 383 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
SMN2-204ENST00000503678 CADPSQ9ULU8 1353 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 XYLBO75191 536 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 GADD45BO75293 160 aaPredicted RBP6.82□□□□□ -1.32
SMN2-204ENST00000503678 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 GJA8P48165 433 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 RBL2Q08999 1139 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
SMN2-204ENST00000503678 NOC4LQ9BVI4 516 aaKnown RBP6.82□□□□□ -1.32
SMN2-204ENST00000503678 HIRIP3Q9BW71 556 aaPredicted RBP6.82□□□□□ -1.32
SMN2-204ENST00000503678 ABI2Q9NYB9 513 aaPredicted RBP6.82□□□□□ -1.32
SMN2-204ENST00000503678 GSTT1P30711 240 aa6.81□□□□□ -1.32
SMN2-204ENST00000503678 NLRP13Q86W25 1043 aa6.81□□□□□ -1.32
SMN2-204ENST00000503678 CEP63Q96MT8 703 aa6.81□□□□□ -1.32
SMN2-204ENST00000503678 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
SMN2-204ENST00000503678 PPP4R2Q9NY27 417 aa6.81□□□□□ -1.32
SMN2-204ENST00000503678 EREGO14944 169 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 FAM157BP0CG42 384 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
SMN2-204ENST00000503678 SAMD5Q5TGI4 173 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 KIAA0319Q5VV43 1072 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 GIMAP6Q6P9H5 292 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 C1orf127Q8N9H9 656 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 MARK1Q9P0L2 795 aa6.8□□□□□ -1.32
SMN2-204ENST00000503678 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms