RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PODXL2Q9NZ53 605 aa13.74□□□□□ -0.21
SNCA-207ENST00000502987 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
SNCA-207ENST00000502987 COL4A1P02462 1669 aa13.74□□□□□ -0.21
SNCA-207ENST00000502987 MYH3P11055 1940 aa13.73□□□□□ -0.21
SNCA-207ENST00000502987 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
SNCA-207ENST00000502987 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
SNCA-207ENST00000502987 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
SNCA-207ENST00000502987 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
SNCA-207ENST00000502987 SAPCD2Q86UD0 394 aa13.73□□□□□ -0.21
SNCA-207ENST00000502987 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
SNCA-207ENST00000502987 XDHP47989 1333 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 MAP3K13O43283 966 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 IGKV5-2P06315 115 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 CTSWP56202 376 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 G2E3Q7L622 706 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
SNCA-207ENST00000502987 RTL9Q8NET4 1388 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 EGFRP00533 1210 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
SNCA-207ENST00000502987 MAP2K2P36507 400 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 HUNKP57058 714 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 FKBP5Q13451 457 aaPredicted RBP13.71□□□□□ -0.21
SNCA-207ENST00000502987 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 UBE3BQ7Z3V4 1068 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 C2orf69Q8N8R5 385 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 GREM2Q9H772 168 aa13.71□□□□□ -0.21
SNCA-207ENST00000502987 SCN9AQ15858 1988 aa13.71□□□□□ -0.22
SNCA-207ENST00000502987 IL16Q14005 1332 aa13.7□□□□□ -0.22
SNCA-207ENST00000502987 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
SNCA-207ENST00000502987 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
SNCA-207ENST00000502987 TSKSQ9UJT2 592 aa13.7□□□□□ -0.22
SNCA-207ENST00000502987 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
SNCA-207ENST00000502987 FLIIQ13045 1269 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
SNCA-207ENST00000502987 AGBL3Q8NEM8 1001 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 HHIPL1Q96JK4 782 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 MYH16Q9H6N6 1097 aa13.69□□□□□ -0.22
SNCA-207ENST00000502987 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
SNCA-207ENST00000502987 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
SNCA-207ENST00000502987 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 H7C1W4 665 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
SNCA-207ENST00000502987 SCARF1Q14162 830 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 PODNQ7Z5L7 613 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 GBA2Q9HCG7 927 aaPredicted RBP13.68□□□□□ -0.22
SNCA-207ENST00000502987 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 MINPP1Q9UNW1 487 aa13.68□□□□□ -0.22
SNCA-207ENST00000502987 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
SNCA-207ENST00000502987 WTIPA6NIX2 430 aaPredicted RBP13.67□□□□□ -0.22
SNCA-207ENST00000502987 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
SNCA-207ENST00000502987 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
SNCA-207ENST00000502987 GCKRQ14397 625 aa13.67□□□□□ -0.22
SNCA-207ENST00000502987 CA12O43570 354 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 ITGA6P23229 1130 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 KCNJ4P48050 445 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 ZNF157P51786 506 aaPredicted RBP13.66□□□□□ -0.22
SNCA-207ENST00000502987 NOGQ13253 232 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 ANGEL2Q5VTE6 544 aaKnown RBP13.66□□□□□ -0.22
SNCA-207ENST00000502987 RGMBQ6NW40 437 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 ANKRD2Q9GZV1 360 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 MYOZ2Q9NPC6 264 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 PSME4Q14997 1843 aa13.66□□□□□ -0.22
SNCA-207ENST00000502987 ASTN2O75129 1339 aaPredicted RBP13.65□□□□□ -0.22
SNCA-207ENST00000502987 CASP8AP2Q9UKL3 1982 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 THSD7BQ9C0I4 1608 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 VAMP4O75379 141 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
SNCA-207ENST00000502987 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
SNCA-207ENST00000502987 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
SNCA-207ENST00000502987 MED23Q9ULK4 1368 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 CDCA5Q96FF9 252 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
SNCA-207ENST00000502987 F6X3S4 739 aa13.63□□□□□ -0.23
SNCA-207ENST00000502987 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
SNCA-207ENST00000502987 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
SNCA-207ENST00000502987 GMLQ99445 158 aa13.63□□□□□ -0.23
SNCA-207ENST00000502987 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
SNCA-207ENST00000502987 PLA2G12BQ9BX93 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms