RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 RPIAP49247 311 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 SMC5Q8IY18 1101 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 ANKRD44Q8N8A2 993 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 ZNF496Q96IT1 587 aaPredicted RBP8.68□□□□□ -1.02
MED28-202ENST00000499786 MEIS3Q99687 375 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 SPATA31A1Q5TZJ5 1347 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 DOT1LQ8TEK3 1739 aa8.68□□□□□ -1.02
MED28-202ENST00000499786 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.68□□□□□ -1.02
MED28-202ENST00000499786 ALDH1L1O75891 902 aa8.67□□□□□ -1.02
MED28-202ENST00000499786 DDB1Q16531 1140 aa8.67□□□□□ -1.02
MED28-202ENST00000499786 CEP85Q6P2H3 762 aa8.67□□□□□ -1.02
MED28-202ENST00000499786 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
MED28-202ENST00000499786 C8orf37Q96NL8 207 aa8.67□□□□□ -1.02
MED28-202ENST00000499786 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
MED28-202ENST00000499786 ITGB4P16144 1822 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 GLI3P10071 1580 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 ADCY9O60503 1353 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 PI4KAP2A4QPH2 592 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 ANXA1P04083 346 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 MYL6BP14649 208 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 NUCB1Q02818 461 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 KSR2Q6VAB6 950 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 CHD1LQ86WJ1 897 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 UNC5CLQ8IV45 518 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 PI4KAP1Q8N8J0 262 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 POM121Q96HA1 1249 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
MED28-202ENST00000499786 UPF2Q9HAU5 1272 aaKnown RBP8.66□□□□□ -1.02
MED28-202ENST00000499786 FKBPLQ9UIM3 349 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 MAP3K2Q9Y2U5 619 aa8.66□□□□□ -1.02
MED28-202ENST00000499786 APBB1O00213 710 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 EIF5BO60841 1220 aaKnown RBP8.65□□□□□ -1.02
MED28-202ENST00000499786 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.02
MED28-202ENST00000499786 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
MED28-202ENST00000499786 SKAP1Q86WV1 359 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
MED28-202ENST00000499786 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 C9orf78Q9NZ63 289 aaPredicted RBP8.65□□□□□ -1.02
MED28-202ENST00000499786 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.02
MED28-202ENST00000499786 AFDNP55196 1824 aaKnown RBP8.64□□□□□ -1.03
MED28-202ENST00000499786 ZC3H4Q9UPT8 1303 aaKnown RBP8.64□□□□□ -1.03
MED28-202ENST00000499786 PRAMEF22A3QJZ6 481 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 PTCD1O75127 700 aaKnown RBP8.64□□□□□ -1.03
MED28-202ENST00000499786 STARD3NLO95772 234 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 HSPA1LP34931 641 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 SLC19A1P41440 591 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 TRIM32Q13049 653 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 IRF5Q13568 498 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 PROSER3Q2NL68 480 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 BEND3Q5T5X7 828 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 ARMC2Q8NEN0 867 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 XAGE3Q8WTP9 111 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 BAP1Q92560 729 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 LNPKQ9C0E8 428 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 GDPD2Q9HCC8 539 aa8.64□□□□□ -1.03
MED28-202ENST00000499786 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
MED28-202ENST00000499786 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
MED28-202ENST00000499786 BCL9O00512 1426 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 IBTKQ9P2D0 1353 aaPredicted RBP8.63□□□□□ -1.03
MED28-202ENST00000499786 A6NJR5 290 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 RGS20O76081 388 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 SKOR1P84550 965 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 VPS72Q15906 364 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 HSP90AB4PQ58FF6 505 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
MED28-202ENST00000499786 OCSTAMPQ9BR26 566 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 DCTPP1Q9H773 170 aa8.63□□□□□ -1.03
MED28-202ENST00000499786 SH3BP2P78314 561 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
MED28-202ENST00000499786 PDXDC2PQ6P474 469 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 ERICH6Q7L0X2 663 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 COPS6Q7L5N1 327 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 SH3BP5LQ7L8J4 393 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
MED28-202ENST00000499786 ZNF511Q8NB15 262 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 MYD88Q99836 296 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 USP21Q9UK80 565 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 NUP188Q5SRE5 1749 aa8.62□□□□□ -1.03
MED28-202ENST00000499786 GRM8O00222 908 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 ZBTB24O43167 697 aaPredicted RBP8.61□□□□□ -1.03
MED28-202ENST00000499786 CD2BP2O95400 341 aaKnown RBP8.61□□□□□ -1.03
MED28-202ENST00000499786 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 C8orf34Q49A92 452 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 SIRT2Q8IXJ6 389 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 PLBD2Q8NHP8 589 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 PIGBQ92521 554 aa8.61□□□□□ -1.03
MED28-202ENST00000499786 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
MED28-202ENST00000499786 METTL22Q9BUU2 404 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms