RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 PPM1GO15355 546 aaPredicted RBP7.65□□□□□ -1.18
SPTA1-209ENST00000498708 CELF2O95319 508 aaKnown RBP7.65□□□□□ -1.18
SPTA1-209ENST00000498708 PDE6BP35913 854 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 EPS15P42566 896 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 CTC1Q2NKJ3 1217 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 OLFM4Q6UX06 510 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 C7orf43Q8WVR3 580 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 PUS7Q96PZ0 661 aaKnown RBP7.65□□□□□ -1.18
SPTA1-209ENST00000498708 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 BRIP1Q9BX63 1249 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 AAASQ9NRG9 546 aa7.65□□□□□ -1.18
SPTA1-209ENST00000498708 SCN11AQ9UI33 1791 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 ARFGEF2Q9Y6D5 1785 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 BRCA2P51587 3418 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 FLT4P35916 1363 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 FZD9O00144 591 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 AVPP01185 164 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 CABP4P57796 275 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 PRR5LQ6MZQ0 368 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 DNAJC10Q8IXB1 793 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 GPC2Q8N158 579 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 SLC17A8Q8NDX2 589 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 REPIN1Q9BWE0 567 aaKnown RBP7.64□□□□□ -1.19
SPTA1-209ENST00000498708 EMILIN1Q9Y6C2 1016 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 GJA3Q9Y6H8 435 aa7.64□□□□□ -1.19
SPTA1-209ENST00000498708 CENPFP49454 3210 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 AKAP11Q9UKA4 1901 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 TRPA1O75762 1119 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 SRGNP10124 158 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 SCNN1DP51172 638 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 FKBP4Q02790 459 aaKnown RBP eCLIP7.63□□□□□ -1.19
SPTA1-209ENST00000498708 TBC1D9BQ66K14 1250 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 STYK1Q6J9G0 422 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 CTU1Q7Z7A3 348 aaKnown RBP7.63□□□□□ -1.19
SPTA1-209ENST00000498708 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 SYNE4Q8N205 404 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 NFATC2IPQ8NCF5 419 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
SPTA1-209ENST00000498708 HLA-CQ95604 372 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 CNKSR1Q969H4 720 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 HHIPL1Q96JK4 782 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 RNF186Q9NXI6 227 aa7.63□□□□□ -1.19
SPTA1-209ENST00000498708 COL15A1P39059 1388 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 AXIN1O15169 862 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 ZMYND10O75800 440 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 CYP19A1P11511 503 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-209ENST00000498708 SSTR3P32745 418 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-209ENST00000498708 NOGQ13253 232 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 TTLL12Q14166 644 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-209ENST00000498708 SOGA3Q5TF21 947 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 ZNF775Q96BV0 537 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-209ENST00000498708 GLIS2Q9BZE0 524 aaPredicted RBP7.62□□□□□ -1.19
SPTA1-209ENST00000498708 ZBTB1Q9Y2K1 713 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 COL4A5P29400 1685 aa7.62□□□□□ -1.19
SPTA1-209ENST00000498708 TRIOBPQ9H2D6 2365 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 FAM155AB1AL88 458 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-209ENST00000498708 FDX1P10109 184 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 JUNDP17535 347 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 IARSP41252 1262 aaKnown RBP7.61□□□□□ -1.19
SPTA1-209ENST00000498708 TNNT2P45379 298 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-209ENST00000498708 WNT7BP56706 349 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 KIF23Q02241 960 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-209ENST00000498708 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 DLK2Q6UY11 383 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 USP50Q70EL3 339 aaPredicted RBP7.61□□□□□ -1.19
SPTA1-209ENST00000498708 CARD14Q9BXL6 1004 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 ZNF408Q9H9D4 720 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 SAGE1Q9NXZ1 904 aa7.61□□□□□ -1.19
SPTA1-209ENST00000498708 KIF24Q5T7B8 1368 aa7.6□□□□□ -1.19
SPTA1-209ENST00000498708 LMOD1P29536 600 aaPredicted RBP7.6□□□□□ -1.19
SPTA1-209ENST00000498708 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
SPTA1-209ENST00000498708 GUCA2AQ02747 115 aa7.6□□□□□ -1.19
SPTA1-209ENST00000498708 AMHR2Q16671 573 aa7.6□□□□□ -1.19
SPTA1-209ENST00000498708 AKAP4Q5JQC9 854 aa7.6□□□□□ -1.19
SPTA1-209ENST00000498708 MASTLQ96GX5 879 aa7.6□□□□□ -1.19
SPTA1-209ENST00000498708 RANBP2P49792 3224 aaKnown RBP7.59□□□□□ -1.19
SPTA1-209ENST00000498708 BCORQ6W2J9 1755 aa7.59□□□□□ -1.19
SPTA1-209ENST00000498708 HSP90AB1P08238 724 aaKnown RBP7.59□□□□□ -1.19
SPTA1-209ENST00000498708 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
SPTA1-209ENST00000498708 MTHFSP49914 203 aa7.59□□□□□ -1.19
SPTA1-209ENST00000498708 HUNKP57058 714 aa7.59□□□□□ -1.19
SPTA1-209ENST00000498708 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
SPTA1-209ENST00000498708 MRGPRX2Q96LB1 330 aa7.59□□□□□ -1.19
SPTA1-209ENST00000498708 HTTP42858 3142 aa7.59□□□□□ -1.19
SPTA1-209ENST00000498708 KIF20BQ96Q89 1820 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 C6orf229H3BNL8 230 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 EIF6P56537 245 aaKnown RBP7.58□□□□□ -1.2
SPTA1-209ENST00000498708 CDCA8Q53HL2 280 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 SYMPKQ92797 1274 aaKnown RBP7.58□□□□□ -1.2
SPTA1-209ENST00000498708 CSRNP1Q96S65 589 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 CEP290O15078 2479 aa7.58□□□□□ -1.2
SPTA1-209ENST00000498708 WASHC2AQ641Q2 1341 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 SPDYE5A6NIY4 337 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 SMPD1P17405 629 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 HIRAP54198 1017 aaPredicted RBP7.57□□□□□ -1.2
SPTA1-209ENST00000498708 SLC39A6Q13433 755 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 DIXDC1Q155Q3 683 aa7.57□□□□□ -1.2
SPTA1-209ENST00000498708 PKN2Q16513 984 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms