RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 SCARF1Q14162 830 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 TTF1Q15361 905 aaPredicted RBP8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 TMC4Q7Z404 712 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 C2CD5Q86YS7 1000 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 FAM227BQ96M60 508 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 TMX4Q9H1E5 349 aaPredicted RBP8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 ANTXR1Q9H6X2 564 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 MYH3P11055 1940 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 ZNF804BA4D1E1 1349 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 XDHP47989 1333 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 WTIPA6NIX2 430 aaPredicted RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 H0YIN7 160 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 RNF113AO15541 343 aaKnown RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 SRGNP10124 158 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 MCAMP43121 646 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 GYG1P46976 350 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 BECN1Q14457 450 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 ZSCAN25Q6NSZ9 544 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 TICAM2Q86XR7 235 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 SPATA5Q8NB90 893 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.048e-7■■■□□ 14.9
GPATCH4-209ENST00000498641 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 PDGFDQ9GZP0 370 aaPredicted RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 HMG20BQ9P0W2 317 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 NSFL1CQ9UNZ2 370 aaKnown RBP8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 LEMD3Q9Y2U8 911 aa8.57□□□□□ -1.04
GPATCH4-209ENST00000498641 RAD50Q92878 1312 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 A0A0D9SFI3 127 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 EPB41L2O43491 1005 aaKnown RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 IDH1O75874 414 aaKnown RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 ZFYP08048 801 aaPredicted RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 HIBADHP31937 336 aaKnown RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 GPSM2P81274 684 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 WASHC4Q2M389 1173 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 MCMDC2Q4G0Z9 681 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 SP8Q8IXZ3 490 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 FAM84BQ96KN1 310 aaPredicted RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 IL25Q9H293 177 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 HELLSQ9NRZ9 838 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 IQSEC3Q9UPP2 1182 aaPredicted RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 RFX7Q2KHR2 1363 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 EP400Q96L91 3159 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 COL4A1P02462 1669 aa8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
GPATCH4-209ENST00000498641 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 UFL1O94874 794 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 CYP2E1P05181 493 aaPredicted RBP8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 MAP3K12Q12852 859 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 UPF1Q92900 1129 aaKnown RBP eCLIP8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 LSG1Q9H089 658 aaKnown RBP8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 PIH1D3Q9NQM4 214 aaKnown RBP8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 LRP2BPQ9P2M1 347 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 DENND2AQ9ULE3 1009 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 ATP6V0A2Q9Y487 856 aa8.55□□□□□ -1.04
GPATCH4-209ENST00000498641 SEMA3EO15041 775 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 ZBTB7AO95365 584 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 CHGBP05060 677 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 KLRK1P26718 216 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 POLD1P28340 1107 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 CHRNA5P30532 468 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 PTH1RQ03431 593 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 R3HDM1Q15032 1099 aaKnown RBP8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 SLC9C2Q5TAH2 1124 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 CCDC129Q6ZRS4 1044 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 ZNF804AQ7Z570 1209 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 SEC62Q99442 399 aaKnown RBP8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 CCDC171Q6TFL3 1326 aa8.54□□□□□ -1.04
GPATCH4-209ENST00000498641 TUBGCP6Q96RT7 1819 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 HSPA4P34932 840 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 ANAPC15P60006 121 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 CHAF1AQ13111 956 aaPredicted RBP8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 RABEP1Q15276 862 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 DPP8Q6V1X1 898 aaPredicted RBP8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 TXNRD3Q86VQ6 643 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 HSCBQ8IWL3 235 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 MPNDQ8N594 471 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 TBC1D16Q8TBP0 767 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 APPBP2Q92624 585 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 GPR101Q96P66 508 aaPredicted RBP8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 KIF2CQ99661 725 aa8.53□□□□□ -1.04
GPATCH4-209ENST00000498641 PODXL2Q9NZ53 605 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms