RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
CNOT4-211ENST00000498534 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
CNOT4-211ENST00000498534 FAM155AB1AL88 458 aaPredicted RBP15.4■□□□□ 0.06
CNOT4-211ENST00000498534 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
CNOT4-211ENST00000498534 CWF19L2Q2TBE0 894 aaKnown RBP15.4■□□□□ 0.06
CNOT4-211ENST00000498534 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
CNOT4-211ENST00000498534 CDCA5Q96FF9 252 aa15.4■□□□□ 0.06
CNOT4-211ENST00000498534 GREM2Q9H772 168 aa15.4■□□□□ 0.06
CNOT4-211ENST00000498534 SCN9AQ15858 1988 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 CASP8AP2Q9UKL3 1982 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 NEURL1BA8MQ27 555 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 H7C1W4 665 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 IGHMBP2P38935 993 aaKnown RBP15.39■□□□□ 0.05
CNOT4-211ENST00000498534 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
CNOT4-211ENST00000498534 UBE3BQ7Z3V4 1068 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
CNOT4-211ENST00000498534 GMLQ99445 158 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 LEMD3Q9Y2U8 911 aa15.39■□□□□ 0.05
CNOT4-211ENST00000498534 ASTN2O75129 1339 aaPredicted RBP15.39■□□□□ 0.05
CNOT4-211ENST00000498534 FKBP1BP68106 108 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 DGKZQ13574 1117 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 SAGE1Q9NXZ1 904 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 IL16Q14005 1332 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 PITPNM2Q9BZ72 1349 aa15.38■□□□□ 0.05
CNOT4-211ENST00000498534 ZNF609O15014 1411 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 MMP14P50281 582 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 STRIP1Q5VSL9 837 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 G2E3Q7L622 706 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 FBXW7Q969H0 707 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 MPHOSPH8Q99549 860 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
CNOT4-211ENST00000498534 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 WTIPA6NIX2 430 aaPredicted RBP15.36■□□□□ 0.05
CNOT4-211ENST00000498534 TRPA1O75762 1119 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 SLC10A3P09131 477 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 MLLT1Q03111 559 aaPredicted RBP15.36■□□□□ 0.05
CNOT4-211ENST00000498534 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
CNOT4-211ENST00000498534 GCKRQ14397 625 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 FAM161AQ3B820 660 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 RNF186Q9NXI6 227 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 MYO3BQ8WXR4 1341 aa15.36■□□□□ 0.05
CNOT4-211ENST00000498534 ITGA6P23229 1130 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 KCNJ4P48050 445 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 RGS19P49795 217 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
CNOT4-211ENST00000498534 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 TTLL5Q6EMB2 1281 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 PLA2G12BQ9BX93 195 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 ZNF804BA4D1E1 1349 aa15.35■□□□□ 0.05
CNOT4-211ENST00000498534 CSF1RP07333 972 aa15.34■□□□□ 0.05
CNOT4-211ENST00000498534 NF2P35240 595 aa15.34■□□□□ 0.05
CNOT4-211ENST00000498534 TTLL12Q14166 644 aaPredicted RBP15.34■□□□□ 0.05
CNOT4-211ENST00000498534 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
CNOT4-211ENST00000498534 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
CNOT4-211ENST00000498534 MYH3P11055 1940 aa15.33■□□□□ 0.05
CNOT4-211ENST00000498534 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
CNOT4-211ENST00000498534 MXD3Q9BW11 206 aa15.33■□□□□ 0.04
CNOT4-211ENST00000498534 MRS2Q9HD23 443 aa15.33■□□□□ 0.04
CNOT4-211ENST00000498534 PSME4Q14997 1843 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 UBE2Q2LH0YL09 131 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 WNT10BO00744 389 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 VAMP4O75379 141 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 TXNRD3Q86VQ6 643 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 SCAF8Q9UPN6 1271 aaKnown RBP15.32■□□□□ 0.04
CNOT4-211ENST00000498534 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
CNOT4-211ENST00000498534 AKAP11Q9UKA4 1901 aa15.32■□□□□ 0.04
CNOT4-211ENST00000498534 GTF2IP78347 998 aa15.31■□□□□ 0.04
CNOT4-211ENST00000498534 PRAMEF18Q5VWM3 479 aa15.31■□□□□ 0.04
CNOT4-211ENST00000498534 ANP32CO43423 234 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 CASP7P55210 303 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 CHRNDQ07001 517 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
CNOT4-211ENST00000498534 MOB2Q70IA6 237 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 KIAA0825Q8IV33 1275 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 CHMP3Q9Y3E7 222 aa15.3■□□□□ 0.04
CNOT4-211ENST00000498534 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
CNOT4-211ENST00000498534 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
CNOT4-211ENST00000498534 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
CNOT4-211ENST00000498534 CD209Q9NNX6 404 aa15.29■□□□□ 0.04
CNOT4-211ENST00000498534 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
CNOT4-211ENST00000498534 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
CNOT4-211ENST00000498534 SASH1O94885 1247 aa15.28■□□□□ 0.04
CNOT4-211ENST00000498534 DLGAP5Q15398 846 aa15.28■□□□□ 0.04
CNOT4-211ENST00000498534 PAPPA2Q9BXP8 1791 aa15.28■□□□□ 0.04
CNOT4-211ENST00000498534 TAF5LO75529 589 aa15.27■□□□□ 0.04
CNOT4-211ENST00000498534 KLRK1P26718 216 aa15.27■□□□□ 0.04
CNOT4-211ENST00000498534 FOXO4P98177 505 aa15.27■□□□□ 0.04
CNOT4-211ENST00000498534 CCDC57Q2TAC2 916 aa15.27■□□□□ 0.04
CNOT4-211ENST00000498534 TAF7LQ5H9L4 462 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms