RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 SLC4A2P04920 1241 aa22.5■■□□□ 1.19
SMIM19-206ENST00000498447 SLC10A3P09131 477 aa22.5■■□□□ 1.19
SMIM19-206ENST00000498447 CCT4P50991 539 aaKnown RBP22.5■■□□□ 1.19
SMIM19-206ENST00000498447 FAM161AQ3B820 660 aa22.5■■□□□ 1.19
SMIM19-206ENST00000498447 PITPNM2Q9BZ72 1349 aa22.5■■□□□ 1.19
SMIM19-206ENST00000498447 SAGE1Q9NXZ1 904 aa22.49■■□□□ 1.19
SMIM19-206ENST00000498447 ZNF646O15015 1829 aaPredicted RBP22.49■■□□□ 1.19
SMIM19-206ENST00000498447 IL16Q14005 1332 aa22.49■■□□□ 1.19
SMIM19-206ENST00000498447 DGKZQ13574 1117 aa22.48■■□□□ 1.19
SMIM19-206ENST00000498447 PAPPA2Q9BXP8 1791 aa22.48■■□□□ 1.19
SMIM19-206ENST00000498447 IGHMBP2P38935 993 aaKnown RBP22.47■■□□□ 1.19
SMIM19-206ENST00000498447 FLIIQ13045 1269 aa22.47■■□□□ 1.19
SMIM19-206ENST00000498447 GCKRQ14397 625 aa22.47■■□□□ 1.19
SMIM19-206ENST00000498447 DACT2Q5SW24 774 aa22.47■■□□□ 1.19
SMIM19-206ENST00000498447 MXD3Q9BW11 206 aa22.47■■□□□ 1.19
SMIM19-206ENST00000498447 FKBP1BP68106 108 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 PLA2G12BQ9BX93 195 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 COA1Q9GZY4 146 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 RNF186Q9NXI6 227 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 LEMD3Q9Y2U8 911 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 AKAP11Q9UKA4 1901 aa22.46■■□□□ 1.19
SMIM19-206ENST00000498447 ITGA6P23229 1130 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 RGS19P49795 217 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 NCBP3Q53F19 620 aaKnown RBP22.45■■□□□ 1.18
SMIM19-206ENST00000498447 STRIP1Q5VSL9 837 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 TXNRD3Q86VQ6 643 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 RASAL3Q86YV0 1011 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 FBXW7Q969H0 707 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 SCAF8Q9UPN6 1271 aaKnown RBP22.45■■□□□ 1.18
SMIM19-206ENST00000498447 MYO3BQ8WXR4 1341 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 FANCIQ9NVI1 1328 aa22.45■■□□□ 1.18
SMIM19-206ENST00000498447 TRPA1O75762 1119 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 CASP7P55210 303 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 FKBP5Q13451 457 aaPredicted RBP22.44■■□□□ 1.18
SMIM19-206ENST00000498447 NBPF9Q3BBW0 867 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 OGFOD1Q8N543 542 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 DNAAF4Q8WXU2 420 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 CSRNP1Q96S65 589 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 MYH16Q9H6N6 1097 aa22.44■■□□□ 1.18
SMIM19-206ENST00000498447 CACNA1FO60840 1977 aa22.43■■□□□ 1.18
SMIM19-206ENST00000498447 ZNF804BA4D1E1 1349 aa22.43■■□□□ 1.18
SMIM19-206ENST00000498447 MLLT1Q03111 559 aaPredicted RBP22.43■■□□□ 1.18
SMIM19-206ENST00000498447 LINS1Q8NG48 757 aa22.43■■□□□ 1.18
SMIM19-206ENST00000498447 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
SMIM19-206ENST00000498447 CSF1RP07333 972 aa22.42■■□□□ 1.18
SMIM19-206ENST00000498447 KLRK1P26718 216 aa22.42■■□□□ 1.18
SMIM19-206ENST00000498447 MOB2Q70IA6 237 aa22.42■■□□□ 1.18
SMIM19-206ENST00000498447 MPHOSPH8Q99549 860 aa22.42■■□□□ 1.18
SMIM19-206ENST00000498447 WNT10BO00744 389 aa22.41■■□□□ 1.18
SMIM19-206ENST00000498447 PRAMEF18Q5VWM3 479 aa22.41■■□□□ 1.18
SMIM19-206ENST00000498447 REM2Q8IYK8 340 aaPredicted RBP22.41■■□□□ 1.18
SMIM19-206ENST00000498447 MRS2Q9HD23 443 aa22.4■■□□□ 1.18
SMIM19-206ENST00000498447 UBE2Q2LH0YL09 131 aa22.39■■□□□ 1.17
SMIM19-206ENST00000498447 VAMP4O75379 141 aa22.39■■□□□ 1.17
SMIM19-206ENST00000498447 SASH1O94885 1247 aa22.39■■□□□ 1.17
SMIM19-206ENST00000498447 CHRNDQ07001 517 aa22.39■■□□□ 1.17
SMIM19-206ENST00000498447 TTLL5Q6EMB2 1281 aa22.39■■□□□ 1.17
SMIM19-206ENST00000498447 KCNJ4P48050 445 aa22.38■■□□□ 1.17
SMIM19-206ENST00000498447 MMP14P50281 582 aa22.38■■□□□ 1.17
SMIM19-206ENST00000498447 KIAA0825Q8IV33 1275 aa22.38■■□□□ 1.17
SMIM19-206ENST00000498447 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
SMIM19-206ENST00000498447 ANKRD18BA2A2Z9 1011 aa22.37■■□□□ 1.17
SMIM19-206ENST00000498447 GTF2IP78347 998 aa22.37■■□□□ 1.17
SMIM19-206ENST00000498447 EXOSC9Q06265 439 aaKnown RBP22.37■■□□□ 1.17
SMIM19-206ENST00000498447 TTLL12Q14166 644 aaPredicted RBP22.37■■□□□ 1.17
SMIM19-206ENST00000498447 WDR63Q8IWG1 891 aa22.37■■□□□ 1.17
SMIM19-206ENST00000498447 NF2P35240 595 aa22.36■■□□□ 1.17
SMIM19-206ENST00000498447 HDAC9Q9UKV0 1011 aa22.36■■□□□ 1.17
SMIM19-206ENST00000498447 A0A1B0GUL6 1792 aa22.35■■□□□ 1.17
SMIM19-206ENST00000498447 SNAP23O00161 211 aa22.35■■□□□ 1.17
SMIM19-206ENST00000498447 CD209Q9NNX6 404 aa22.35■■□□□ 1.17
SMIM19-206ENST00000498447 IRS2Q9Y4H2 1338 aa22.34■■□□□ 1.17
SMIM19-206ENST00000498447 F6X3S4 739 aa22.34■■□□□ 1.17
SMIM19-206ENST00000498447 FOXO4P98177 505 aa22.34■■□□□ 1.17
SMIM19-206ENST00000498447 IFIT5Q13325 482 aaKnown RBP22.34■■□□□ 1.17
SMIM19-206ENST00000498447 APOBEC3FQ8IUX4 373 aaKnown RBP22.34■■□□□ 1.17
SMIM19-206ENST00000498447 ZBED3Q96IU2 234 aaPredicted RBP22.34■■□□□ 1.17
SMIM19-206ENST00000498447 TAF5LO75529 589 aa22.33■■□□□ 1.17
SMIM19-206ENST00000498447 BEND3Q5T5X7 828 aa22.33■■□□□ 1.17
SMIM19-206ENST00000498447 CTU1Q7Z7A3 348 aaKnown RBP22.33■■□□□ 1.17
SMIM19-206ENST00000498447 HELBQ8NG08 1087 aaPredicted RBP22.33■■□□□ 1.17
SMIM19-206ENST00000498447 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
SMIM19-206ENST00000498447 C15orf52Q6ZUT6 534 aaKnown RBP22.32■■□□□ 1.16
SMIM19-206ENST00000498447 ANP32CO43423 234 aa22.31■■□□□ 1.16
SMIM19-206ENST00000498447 CERS5Q8N5B7 392 aa22.31■■□□□ 1.16
SMIM19-206ENST00000498447 SPINK5Q9NQ38 1064 aaPredicted RBP22.31■■□□□ 1.16
SMIM19-206ENST00000498447 COL1A1P02452 1464 aaPredicted RBP22.3■■□□□ 1.16
SMIM19-206ENST00000498447 PRKG1Q13976 671 aa22.3■■□□□ 1.16
SMIM19-206ENST00000498447 LMBR1LQ6UX01 489 aa22.3■■□□□ 1.16
SMIM19-206ENST00000498447 ARMC9Q7Z3E5 817 aa22.3■■□□□ 1.16
SMIM19-206ENST00000498447 TNRC18O15417 2968 aaPredicted RBP22.29■■□□□ 1.16
SMIM19-206ENST00000498447 TBC1D8O95759 1140 aa22.29■■□□□ 1.16
SMIM19-206ENST00000498447 TM4SF4P48230 202 aa22.29■■□□□ 1.16
SMIM19-206ENST00000498447 PTPN12Q05209 780 aaKnown RBP22.29■■□□□ 1.16
SMIM19-206ENST00000498447 MKRN3Q13064 507 aaKnown RBP22.29■■□□□ 1.16
SMIM19-206ENST00000498447 DLGAP5Q15398 846 aa22.29■■□□□ 1.16
SMIM19-206ENST00000498447 EPHA10Q5JZY3 1008 aa22.29■■□□□ 1.16
SMIM19-206ENST00000498447 ZNF804AQ7Z570 1209 aa22.29■■□□□ 1.16
SMIM19-206ENST00000498447 PDE4DIPQ5VU43 2346 aa22.28■■□□□ 1.16
SMIM19-206ENST00000498447 GRM8O00222 908 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms