RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PODNQ7Z5L7 613 aa15.12■□□□□ 0.01
CDK9-205ENST00000498339 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
CDK9-205ENST00000498339 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
CDK9-205ENST00000498339 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
CDK9-205ENST00000498339 MXD3Q9BW11 206 aa15.11■□□□□ 0.01
CDK9-205ENST00000498339 MYO3BQ8WXR4 1341 aa15.11■□□□□ 0.01
CDK9-205ENST00000498339 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
CDK9-205ENST00000498339 WNT10BO00744 389 aa15.1■□□□□ 0.01
CDK9-205ENST00000498339 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 HABP4Q5JVS0 413 aaKnown RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 R3HDMLQ9H3Y0 253 aa15.1■□□□□ 0.01
CDK9-205ENST00000498339 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 ANGEL1Q9UNK9 670 aaKnown RBP15.1■□□□□ 0.01
CDK9-205ENST00000498339 LAMB1P07942 1786 aa15.09■□□□□ 0.01
CDK9-205ENST00000498339 ALDH1A1P00352 501 aa15.09■□□□□ 0.01
CDK9-205ENST00000498339 PCCAP05165 728 aaPredicted RBP15.09■□□□□ 0.01
CDK9-205ENST00000498339 POTEFA5A3E0 1075 aa15.08■□□□□ 0
CDK9-205ENST00000498339 DACT2Q5SW24 774 aa15.08■□□□□ 0
CDK9-205ENST00000498339 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
CDK9-205ENST00000498339 PHAXQ9H814 394 aaKnown RBP15.08■□□□□ 0
CDK9-205ENST00000498339 MANSC4A6NHS7 340 aaPredicted RBP15.07■□□□□ 0
CDK9-205ENST00000498339 CTSWP56202 376 aa15.07■□□□□ 0
CDK9-205ENST00000498339 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
CDK9-205ENST00000498339 SPRYD7Q5W111 196 aa15.07■□□□□ 0
CDK9-205ENST00000498339 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
CDK9-205ENST00000498339 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
CDK9-205ENST00000498339 CFHR5Q9BXR6 569 aa15.07■□□□□ 0
CDK9-205ENST00000498339 FZD1Q9UP38 647 aa15.07■□□□□ 0
CDK9-205ENST00000498339 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
CDK9-205ENST00000498339 COL1A1P02452 1464 aaPredicted RBP15.07■□□□□ 0
CDK9-205ENST00000498339 WTIPA6NIX2 430 aaPredicted RBP15.06■□□□□ 0
CDK9-205ENST00000498339 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
CDK9-205ENST00000498339 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
CDK9-205ENST00000498339 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
CDK9-205ENST00000498339 KIAA0825Q8IV33 1275 aa15.06■□□□□ 0
CDK9-205ENST00000498339 RUNDC1Q96C34 613 aa15.06■□□□□ 0
CDK9-205ENST00000498339 SLC10A4Q96EP9 437 aa15.06■□□□□ 0
CDK9-205ENST00000498339 COA1Q9GZY4 146 aa15.06■□□□□ 0
CDK9-205ENST00000498339 MBIPQ9NS73 344 aa15.06■□□□□ 0
CDK9-205ENST00000498339 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
CDK9-205ENST00000498339 IFNL1Q8IU54 200 aa15.05■□□□□ -0
CDK9-205ENST00000498339 ERO1AQ96HE7 468 aa15.05■□□□□ -0
CDK9-205ENST00000498339 MINPP1Q9UNW1 487 aa15.05■□□□□ -0
CDK9-205ENST00000498339 OTOFQ9HC10 1997 aa15.04■□□□□ -0
CDK9-205ENST00000498339 INHBEP58166 350 aa15.04■□□□□ -0
CDK9-205ENST00000498339 RALBP1Q15311 655 aa15.04■□□□□ -0
CDK9-205ENST00000498339 TTLL5Q6EMB2 1281 aa15.04■□□□□ -0
CDK9-205ENST00000498339 CD99L2Q8TCZ2 262 aa15.04■□□□□ -0
CDK9-205ENST00000498339 GREM2Q9H772 168 aa15.04■□□□□ -0
CDK9-205ENST00000498339 KIAA0100Q14667 2235 aaKnown RBP15.04■□□□□ -0
CDK9-205ENST00000498339 ZBTB48P10074 688 aaPredicted RBP15.03■□□□□ -0
CDK9-205ENST00000498339 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
CDK9-205ENST00000498339 KCNJ4P48050 445 aa15.03■□□□□ -0
CDK9-205ENST00000498339 GTF2IP78347 998 aa15.03■□□□□ -0
CDK9-205ENST00000498339 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
CDK9-205ENST00000498339 WNK4Q96J92 1243 aa15.03■□□□□ -0
CDK9-205ENST00000498339 METTL22Q9BUU2 404 aaPredicted RBP15.03■□□□□ -0
CDK9-205ENST00000498339 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
CDK9-205ENST00000498339 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
CDK9-205ENST00000498339 IGF2BP3O00425 579 aaKnown RBP eCLIP15.02■□□□□ -0
CDK9-205ENST00000498339 PPP1R12BO60237 982 aaPredicted RBP15.02■□□□□ -0
CDK9-205ENST00000498339 MMP14P50281 582 aa15.02■□□□□ -0
CDK9-205ENST00000498339 DLGAP5Q15398 846 aa15.02■□□□□ -0
CDK9-205ENST00000498339 OTUD7BQ6GQQ9 843 aa15.02■□□□□ -0
CDK9-205ENST00000498339 CLMNQ96JQ2 1002 aa15.02■□□□□ -0
CDK9-205ENST00000498339 PTPN22Q9Y2R2 807 aa15.02■□□□□ -0
CDK9-205ENST00000498339 MAP3K2Q9Y2U5 619 aa15.02■□□□□ -0
CDK9-205ENST00000498339 A0A1B0GUL6 1792 aa15.02□□□□□ -0.01
CDK9-205ENST00000498339 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
CDK9-205ENST00000498339 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 TTLL11Q8NHH1 800 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 EFCC1Q9HA90 598 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 LEMD3Q9Y2U8 911 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 SSC5DA1L4H1 1573 aa15.01□□□□□ -0.01
CDK9-205ENST00000498339 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
CDK9-205ENST00000498339 F8W031 263 aaPredicted RBP15□□□□□ -0.01
CDK9-205ENST00000498339 MYO1BO43795 1136 aa15□□□□□ -0.01
CDK9-205ENST00000498339 KLRK1P26718 216 aa15□□□□□ -0.01
CDK9-205ENST00000498339 FXR1P51114 621 aaKnown RBP eCLIP15□□□□□ -0.01
CDK9-205ENST00000498339 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
CDK9-205ENST00000498339 CRHR2Q13324 411 aa15□□□□□ -0.01
CDK9-205ENST00000498339 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
CDK9-205ENST00000498339 VEZTQ9HBM0 779 aa15□□□□□ -0.01
CDK9-205ENST00000498339 CLRN2A0PK11 232 aa14.99□□□□□ -0.01
CDK9-205ENST00000498339 IREB2P48200 963 aaKnown RBP14.99□□□□□ -0.01
CDK9-205ENST00000498339 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
CDK9-205ENST00000498339 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
CDK9-205ENST00000498339 PPP2R3BQ9Y5P8 575 aa14.99□□□□□ -0.01
CDK9-205ENST00000498339 GNAI1P63096 354 aa14.98□□□□□ -0.01
CDK9-205ENST00000498339 SP3Q02447 781 aa14.98□□□□□ -0.01
CDK9-205ENST00000498339 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
CDK9-205ENST00000498339 SUPT20HL1Q3ZLR7 823 aa14.98□□□□□ -0.01
CDK9-205ENST00000498339 ARMC5Q96C12 935 aa14.98□□□□□ -0.01
CDK9-205ENST00000498339 IFT57Q9NWB7 429 aa14.98□□□□□ -0.01
CDK9-205ENST00000498339 PI4KAP2A4QPH2 592 aa14.97□□□□□ -0.01
CDK9-205ENST00000498339 MYCP01106 439 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms