RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 MINDY4BA8MYZ0 360 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 B4GALNT4Q76KP1 1039 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 SLC5A1P13866 664 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 KRBA2Q6ZNG9 492 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 AOPEPQ8N6M6 819 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
C4A-259ENST00000498271 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
C4A-259ENST00000498271 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 CHMLP26374 656 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 KRT83P78385 493 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
C4A-259ENST00000498271 ATRIPQ8WXE1 791 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 PREX2Q70Z35 1606 aa17.15■□□□□ 0.34
C4A-259ENST00000498271 KDM5DQ9BY66 1539 aa17.14■□□□□ 0.34
C4A-259ENST00000498271 KCNA6P17658 529 aa17.14■□□□□ 0.34
C4A-259ENST00000498271 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.34
C4A-259ENST00000498271 RBSNQ9H1K0 784 aa17.14■□□□□ 0.34
C4A-259ENST00000498271 CWF19L2Q2TBE0 894 aaKnown RBP17.14■□□□□ 0.33
C4A-259ENST00000498271 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
C4A-259ENST00000498271 CFAP65Q6ZU64 1925 aaKnown RBP17.14■□□□□ 0.33
C4A-259ENST00000498271 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
C4A-259ENST00000498271 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.33
C4A-259ENST00000498271 TBX22Q9Y458 520 aa17.14■□□□□ 0.33
C4A-259ENST00000498271 ZNF500O60304 480 aaPredicted RBP17.13■□□□□ 0.33
C4A-259ENST00000498271 ATL3Q6DD88 541 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
C4A-259ENST00000498271 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 TACC1O75410 805 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 HAND2P61296 217 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 CAVIN4Q5BKX8 364 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 BRF1Q92994 677 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
C4A-259ENST00000498271 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
C4A-259ENST00000498271 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.13■□□□□ 0.337e-10■■■□□ 15.6
C4A-259ENST00000498271 ATP2B2Q01814 1243 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
C4A-259ENST00000498271 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
C4A-259ENST00000498271 SYT10Q6XYQ8 523 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 IP6K1Q92551 441 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 TTC14Q96N46 770 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
C4A-259ENST00000498271 NMIQ13287 307 aaPredicted RBP17.12■□□□□ 0.33
C4A-259ENST00000498271 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 KRT86O43790 486 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.33
C4A-259ENST00000498271 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
C4A-259ENST00000498271 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
C4A-259ENST00000498271 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 FBF1Q8TES7 1133 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 GCP02774 474 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 HOOK3Q86VS8 718 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 CCDC82Q8N4S0 544 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
C4A-259ENST00000498271 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
C4A-259ENST00000498271 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
C4A-259ENST00000498271 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 CCDC50Q8IVM0 306 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.11■□□□□ 0.33
C4A-259ENST00000498271 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 CCDC114Q96M63 670 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 TMCO5BA8MYB1 307 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 MYOM2P54296 1465 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 UGGT1Q9NYU2 1555 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 AKR1B10O60218 316 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 CCDC6Q16204 474 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
C4A-259ENST00000498271 NEO1Q92859 1461 aa17.11■□□□□ 0.33
C4A-259ENST00000498271 AK2P54819 239 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 ZCRB1Q8TBF4 217 aaKnown RBP17.1■□□□□ 0.33
C4A-259ENST00000498271 PPP1R9BQ96SB3 815 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 IGSF3O75054 1194 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 EVCP57679 992 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 UBE4AQ14139 1066 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 MCMDC2Q4G0Z9 681 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 NCOA7Q8NI08 942 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
C4A-259ENST00000498271 KIF5BP33176 963 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 LRRC2Q9BYS8 371 aa17.1■□□□□ 0.33
C4A-259ENST00000498271 GTF3C6Q969F1 213 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.33
C4A-259ENST00000498271 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
C4A-259ENST00000498271 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 AFAP1L1Q8TED9 768 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 KIF4AO95239 1232 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
C4A-259ENST00000498271 KIAA0753Q2KHM9 967 aa17.09■□□□□ 0.33
C4A-259ENST00000498271 CPSF2Q9P2I0 782 aaKnown RBP17.09■□□□□ 0.33
C4A-259ENST00000498271 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms