RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	TMX4	Q9H1E5	349 aa	Predicted RBP	9.09	□□□□□ -0.95
BBS9-215	ENST00000498189	ZNF330	Q9Y3S2	320 aa	Predicted RBP	9.09	□□□□□ -0.95
BBS9-215	ENST00000498189	SCN7A	Q01118	1682 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	FDX1	P10109	184 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	HSPA6	P17066	643 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	KCNA3	P22001	575 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	GTF2E1	P29083	439 aa	Predicted RBP	9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	ALDH1B1	P30837	517 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	WDR43	Q15061	677 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	CC2D2B	Q6DHV5	1058 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	SMIM5	Q71RC9	77 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	CCDC24	Q8N4L8	307 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	MASTL	Q96GX5	879 aa		9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	N4BP2	Q86UW6	1770 aa	Predicted RBP	9.08	□□□□□ -0.96
BBS9-215	ENST00000498189	RNF123	Q5XPI4	1314 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	LTBP3	Q9NS15	1303 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	CAMTA2	O94983	1202 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	TRIM32	Q13049	653 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	HSP90AB3P	Q58FF7	597 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	C9orf131	Q5VYM1	1079 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	MCM10	Q7L590	875 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	CYP4X1	Q8N118	509 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	SPIRE2	Q8WWL2	714 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	PLEKHF1	Q96S99	279 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	TOR4A	Q9NXH8	423 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	RNF181	Q9P0P0	153 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	KIAA1551	Q9HCM1	1747 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	IBTK	Q9P2D0	1353 aa	Predicted RBP	9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	DLEC1	Q9Y238	1755 aa		9.07	□□□□□ -0.96
BBS9-215	ENST00000498189	A1BG	P04217	495 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	HSP90B1	P14625	803 aa	Known RBP	9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	NPR1	P16066	1061 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	PARP10	Q53GL7	1025 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	TBC1D9B	Q66K14	1250 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	PPP1R42	Q7Z4L9	355 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	RETREG3	Q86VR2	466 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	RTKN2	Q8IZC4	609 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	ZNF622	Q969S3	477 aa	Known RBP eCLIP	9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	PCDHGC3	Q9UN70	934 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	TBC1D2B	Q9UPU7	963 aa		9.06	□□□□□ -0.96
BBS9-215	ENST00000498189	C6orf229	H3BNL8	230 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	HOXB7	P09629	217 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	VEGFA	P15692	232 aa	Predicted RBP	9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	JUND	P17535	347 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	PRR5L	Q6MZQ0	368 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	BICDL1	Q6ZP65	573 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	SMC1B	Q8NDV3	1235 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	TAOK3	Q9H2K8	898 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	TSPYL4	Q9UJ04	414 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	USP16	Q9Y5T5	823 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	UTRN	P46939	3433 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	AFDN	P55196	1824 aa	Known RBP	9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	RIC1	Q4ADV7	1423 aa		9.05	□□□□□ -0.96
BBS9-215	ENST00000498189	LAMB4	A4D0S4	1761 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	BCOR	Q6W2J9	1755 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	TTC24	A2A3L6	582 aa	Predicted RBP	9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	KLRG2	A4D1S0	409 aa	Predicted RBP	9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	IQCA1L	A6NCM1	817 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	GLTPD2	A6NH11	291 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	WNT7A	O00755	349 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	SRGN	P10124	158 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	NDUFV2	P19404	249 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	CHRNA5	P30532	468 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	RIPK4	P57078	832 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	EIF4A1	P60842	406 aa	Known RBP	9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	CCDC93	Q567U6	631 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	ZNF526	Q8TF50	670 aa	Predicted RBP	9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	RUNDC1	Q96C34	613 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	BEGAIN	Q9BUH8	593 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	VPS33B	Q9H267	617 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	PODXL2	Q9NZ53	605 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	MAP3K15	Q6ZN16	1313 aa		9.04	□□□□□ -0.96
BBS9-215	ENST00000498189	MOXD2P	A6NHM9	499 aa		9.03	□□□□□ -0.96
BBS9-215	ENST00000498189	TRIM66	O15016	1216 aa		9.03	□□□□□ -0.96
BBS9-215	ENST00000498189	ST8SIA5	O15466	376 aa		9.03	□□□□□ -0.96
BBS9-215	ENST00000498189	UBE2Q2	Q8WVN8	375 aa		9.03	□□□□□ -0.96
BBS9-215	ENST00000498189	AAAS	Q9NRG9	546 aa		9.03	□□□□□ -0.96
BBS9-215	ENST00000498189	KDM3B	Q7LBC6	1761 aa		9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	CENPB	P07199	599 aa	Predicted RBP	9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	TMPO	P42166	694 aa	Known RBP	9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	ERFE	Q4G0M1	354 aa		9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	TMC4	Q7Z404	712 aa		9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	WWC3	Q9ULE0	1092 aa		9.02	□□□□□ -0.97
BBS9-215	ENST00000498189	POTEC	B2RU33	542 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	KCNQ3	O43525	872 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	DDX10	Q13206	875 aa	Known RBP	9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	DCTN1	Q14203	1278 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	PRPF40B	Q6NWY9	871 aa	Known RBP	9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	PARP9	Q8IXQ6	854 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	SNIP1	Q8TAD8	396 aa	Known RBP	9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	RPGR	Q92834	1020 aa	Known RBP	9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	RBM17	Q96I25	401 aa	Known RBP	9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	MRGPRX2	Q96LB1	330 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	NUDT12	Q9BQG2	462 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	ARFGEF2	Q9Y6D5	1785 aa		9.01	□□□□□ -0.97
BBS9-215	ENST00000498189	GOLGB1	Q14789	3259 aa	Known RBP	9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms