RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 NACC1Q96RE7 527 aa5.23□□□□□ -1.57
RIF1-212ENST00000498041 SMG9Q9H0W8 520 aaKnown RBP5.23□□□□□ -1.57
RIF1-212ENST00000498041 ZFYVE28Q9HCC9 887 aa5.23□□□□□ -1.57
RIF1-212ENST00000498041 KANSL3Q9P2N6 904 aa5.23□□□□□ -1.57
RIF1-212ENST00000498041 SALL4Q9UJQ4 1053 aa5.23□□□□□ -1.57
RIF1-212ENST00000498041 EREGO14944 169 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 IGHA2P01877 340 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 NID1P14543 1247 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 AFF1P51825 1210 aaKnown RBP5.22□□□□□ -1.57
RIF1-212ENST00000498041 COL9A3Q14050 684 aaPredicted RBP5.22□□□□□ -1.57
RIF1-212ENST00000498041 TMC7Q7Z402 723 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 ZSCAN29Q8IWY8 852 aaPredicted RBP5.22□□□□□ -1.57
RIF1-212ENST00000498041 CEP120Q8N960 986 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 ALKBH8Q96BT7 664 aaKnown RBP5.22□□□□□ -1.57
RIF1-212ENST00000498041 NIF3L1Q9GZT8 377 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 AMOTL2Q9Y2J4 779 aa5.22□□□□□ -1.57
RIF1-212ENST00000498041 ZBTB7CA1YPR0 619 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 GPR182O15218 404 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
RIF1-212ENST00000498041 EDN3P14138 238 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 SHISA2Q6UWI4 295 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 TP53INP1Q96A56 240 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 PBX4Q9BYU1 374 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 GZF1Q9H116 711 aaPredicted RBP5.21□□□□□ -1.58
RIF1-212ENST00000498041 USP21Q9UK80 565 aa5.21□□□□□ -1.58
RIF1-212ENST00000498041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.21□□□□□ -1.58
RIF1-212ENST00000498041 CPNE3O75131 537 aaKnown RBP5.2□□□□□ -1.58
RIF1-212ENST00000498041 ATP11AP98196 1134 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 PLCB3Q01970 1234 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 ORC1Q13415 861 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 GRIK5Q16478 980 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 CEP135Q66GS9 1140 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 MSL1Q68DK7 614 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 CACTIN-AS1Q8N1I8 211 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 ASB16Q96NS5 453 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 DNAJC25Q9H1X3 360 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 RASSF4Q9H2L5 321 aa5.2□□□□□ -1.58
RIF1-212ENST00000498041 EIF1AYO14602 144 aaKnown RBP5.19□□□□□ -1.58
RIF1-212ENST00000498041 TREHO43280 583 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 POLR3DP05423 398 aaPredicted RBP5.19□□□□□ -1.58
RIF1-212ENST00000498041 DSC3Q14574 896 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 GDF6Q6KF10 455 aaPredicted RBP5.19□□□□□ -1.58
RIF1-212ENST00000498041 WFDC8Q8IUA0 241 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 GALNT12Q8IXK2 581 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 CSRNP1Q96S65 589 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 OSMRQ99650 979 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 DZANK1Q9NVP4 752 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 TRIM33Q9UPN9 1127 aa5.19□□□□□ -1.58
RIF1-212ENST00000498041 C9orf172C9J069 976 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 NFKBIEO00221 500 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 HYAL3O43820 417 aaPredicted RBP5.18□□□□□ -1.58
RIF1-212ENST00000498041 ACPPP15309 386 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 RAC1P63000 192 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 MBTPS1Q14703 1052 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 USPL1Q5W0Q7 1092 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 ILDR2Q71H61 639 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 DMRTC2Q8IXT2 367 aaPredicted RBP5.18□□□□□ -1.58
RIF1-212ENST00000498041 IL22RA1Q8N6P7 574 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 ZKSCAN3Q9BRR0 538 aa5.18□□□□□ -1.58
RIF1-212ENST00000498041 A0A0A0MRY4 1105 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 FAM177BA6PVY3 158 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 PDE2AO00408 941 aaPredicted RBP5.17□□□□□ -1.58
RIF1-212ENST00000498041 TRPA1O75762 1119 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 SELPP16109 830 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 PTPRAP18433 802 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 CDC27P30260 824 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 LRP8Q14114 963 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 PEAR1Q5VY43 1037 aaPredicted RBP5.17□□□□□ -1.58
RIF1-212ENST00000498041 TXNRD3Q86VQ6 643 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 DTWD1Q8N5C7 304 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 TMEM102Q8N9M5 508 aaPredicted RBP5.17□□□□□ -1.58
RIF1-212ENST00000498041 CCDC74AQ96AQ1 378 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 POP1Q99575 1024 aaKnown RBP5.17□□□□□ -1.58
RIF1-212ENST00000498041 LACRTQ9GZZ8 138 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 ADAM19Q9H013 955 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 MUC3BQ9H195 1237 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 LATS2Q9NRM7 1088 aa5.17□□□□□ -1.58
RIF1-212ENST00000498041 A0A1W2PP55 124 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 NRG1Q02297 640 aaPredicted RBP5.16□□□□□ -1.58
RIF1-212ENST00000498041 FMR1Q06787 632 aaKnown RBP eCLIP5.16□□□□□ -1.58
RIF1-212ENST00000498041 ADGRE1Q14246 886 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 ENOX2Q16206 610 aaKnown RBP5.16□□□□□ -1.58
RIF1-212ENST00000498041 CCDC27Q2M243 656 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 KIAA0319Q5VV43 1072 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 NXPE3Q969Y0 559 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 HHIPQ96QV1 700 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 PPME1Q9Y570 386 aa5.16□□□□□ -1.58
RIF1-212ENST00000498041 PNMA6FA0A0J9YX94 578 aa5.15□□□□□ -1.59
RIF1-212ENST00000498041 ELNP15502 786 aa5.15□□□□□ -1.59
RIF1-212ENST00000498041 MAPK8P45983 427 aa5.15□□□□□ -1.59
RIF1-212ENST00000498041 MAP4K3Q8IVH8 894 aa5.15□□□□□ -1.59
RIF1-212ENST00000498041 FMR1NBQ8N0W7 255 aaPredicted RBP5.15□□□□□ -1.59
RIF1-212ENST00000498041 BHLHE41Q9C0J9 482 aaPredicted RBP5.15□□□□□ -1.59
RIF1-212ENST00000498041 SRA1Q9HD15 236 aaKnown RBP5.15□□□□□ -1.59
RIF1-212ENST00000498041 NPHS2Q9NP85 383 aa5.15□□□□□ -1.59
RIF1-212ENST00000498041 ANKRD33BA6NCL7 494 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 GADD45BO75293 160 aaPredicted RBP5.14□□□□□ -1.59
RIF1-212ENST00000498041 H2AFB1P0C5Y9 115 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 H2AFB2P0C5Z0 115 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms