RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 TIGD1Q96MW7 591 aa15.23■□□□□ 0.03
NXF3-207ENST00000497850 COL5A2P05997 1499 aaPredicted RBP15.23■□□□□ 0.03
NXF3-207ENST00000497850 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
NXF3-207ENST00000497850 UBR2Q8IWV8 1755 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 A0A1B0GUL7 405 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 LIG1P18858 919 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 EVA1CP58658 441 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 KRT85P78386 507 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
NXF3-207ENST00000497850 ERVV-2B6SEH9 535 aa15.21■□□□□ 0.03
NXF3-207ENST00000497850 EYA2O00167 538 aa15.21■□□□□ 0.03
NXF3-207ENST00000497850 TULP2O00295 520 aa15.21■□□□□ 0.03
NXF3-207ENST00000497850 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.03
NXF3-207ENST00000497850 NAA30Q147X3 362 aaPredicted RBP15.21■□□□□ 0.03
NXF3-207ENST00000497850 HSP90AB3PQ58FF7 597 aa15.21■□□□□ 0.03
NXF3-207ENST00000497850 SYNE4Q8N205 404 aa15.21■□□□□ 0.03
NXF3-207ENST00000497850 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
NXF3-207ENST00000497850 KRT32Q14532 448 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 SPC24Q8NBT2 197 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 CAPN2P17655 700 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 ADORA1P30542 326 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 IL15P40933 162 aaPredicted RBP15.2■□□□□ 0.02
NXF3-207ENST00000497850 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
NXF3-207ENST00000497850 M0R2C6 588 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 PDCP20941 246 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 CCT2P78371 535 aaKnown RBP15.19■□□□□ 0.02
NXF3-207ENST00000497850 SCRN1Q12765 414 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 KRT222Q8N1A0 295 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
NXF3-207ENST00000497850 FAM53CQ9NYF3 392 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 CEBPZQ03701 1054 aaKnown RBP15.19■□□□□ 0.02
NXF3-207ENST00000497850 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 SPATA32Q96LK8 384 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 SH3TC1Q8TE82 1336 aa15.19■□□□□ 0.02
NXF3-207ENST00000497850 GOLGA6L6A8MZA4 724 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 PTGS1P23219 599 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 CKAP2LQ8IYA6 745 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
NXF3-207ENST00000497850 TMOD3Q9NYL9 352 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 TOGARAM1Q9Y4F4 1720 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 MAST3O60307 1309 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 ZNF335Q9H4Z2 1342 aaPredicted RBP15.18■□□□□ 0.02
NXF3-207ENST00000497850 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
NXF3-207ENST00000497850 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
NXF3-207ENST00000497850 GPTP24298 496 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
NXF3-207ENST00000497850 H3BQV1 296 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 GORABQ5T7V8 394 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 PI16Q6UXB8 463 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 C16orf45Q96MC5 204 aaPredicted RBP15.17■□□□□ 0.02
NXF3-207ENST00000497850 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 HAND2P61296 217 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
NXF3-207ENST00000497850 SCARF1Q14162 830 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
NXF3-207ENST00000497850 LEO1Q8WVC0 666 aaPredicted RBP15.17■□□□□ 0.02
NXF3-207ENST00000497850 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 CEP126Q9P2H0 1117 aa15.17■□□□□ 0.02
NXF3-207ENST00000497850 E7EWF7 191 aa15.16■□□□□ 0.02
NXF3-207ENST00000497850 RNF113AO15541 343 aaKnown RBP15.16■□□□□ 0.02
NXF3-207ENST00000497850 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
NXF3-207ENST00000497850 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
NXF3-207ENST00000497850 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
NXF3-207ENST00000497850 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
NXF3-207ENST00000497850 HELLSQ9NRZ9 838 aa15.16■□□□□ 0.02
NXF3-207ENST00000497850 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
NXF3-207ENST00000497850 GUCY1B3Q02153 619 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 RESTQ13127 1097 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 TCIRG1Q13488 830 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 ZNF397Q8NF99 534 aaPredicted RBP15.15■□□□□ 0.02
NXF3-207ENST00000497850 PIGBQ92521 554 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 XAGE2Q96GT9 111 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 NUP62CLQ9H1M0 184 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 ERICH4A6NGS2 130 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 KMT5BQ4FZB7 885 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
NXF3-207ENST00000497850 CCDC112Q8NEF3 446 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 PGBD1Q96JS3 809 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 ABCA3Q99758 1704 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 PLEKHG2Q9H7P9 1386 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms