RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 ARMC3Q5W041 872 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 CPXCR1Q8N123 301 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 EAF1Q96JC9 268 aaPredicted RBP8.92□□□□□ -0.98
NEB-216ENST00000497809 EVLQ9UI08 416 aaPredicted RBP8.92□□□□□ -0.98
NEB-216ENST00000497809 BICDL2A1A5D9 508 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 CASP2P42575 452 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 DGKHQ86XP1 1220 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 SMAP1Q8IYB5 467 aaPredicted RBP8.92□□□□□ -0.98
NEB-216ENST00000497809 C9orf78Q9NZ63 289 aaPredicted RBP8.92□□□□□ -0.98
NEB-216ENST00000497809 MCM8Q9UJA3 840 aa8.92□□□□□ -0.98
NEB-216ENST00000497809 EIF1AYO14602 144 aaKnown RBP8.91□□□□□ -0.98
NEB-216ENST00000497809 FOXO3O43524 673 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 DIAPH1O60610 1272 aaKnown RBP8.91□□□□□ -0.98
NEB-216ENST00000497809 F12P00748 615 aaPredicted RBP8.91□□□□□ -0.98
NEB-216ENST00000497809 PIN1Q13526 163 aaPredicted RBP8.91□□□□□ -0.98
NEB-216ENST00000497809 DDR2Q16832 855 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEB-216ENST00000497809 ALKBH2Q6NS38 261 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 NBPF11Q86T75 865 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 MORC1Q86VD1 984 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 TCEAL8Q8IYN2 117 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
NEB-216ENST00000497809 PLAAQ9Y263 795 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 RABGAP1Q9Y3P9 1069 aa8.91□□□□□ -0.98
NEB-216ENST00000497809 SMAPO00193 183 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 IGFBP4P22692 258 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 HALP42357 657 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 APOBRQ0VD83 1088 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 RASGRF1Q13972 1273 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 SKAP1Q86WV1 359 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 FAM169BQ8N8A8 192 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 STIM2Q9P246 746 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 PNMA3Q9UL41 463 aa8.9□□□□□ -0.98
NEB-216ENST00000497809 hCG_1984214I3L0E3 225 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 NBNO60934 754 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 SARSP49591 514 aaKnown RBP8.9□□□□□ -0.99
NEB-216ENST00000497809 FAM102BQ5T8I3 360 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 DESI1Q6ICB0 168 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 RNF180Q86T96 592 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 RETREG3Q86VR2 466 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 RSPH1Q8WYR4 309 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 NUDT16Q96DE0 195 aaKnown RBP8.9□□□□□ -0.99
NEB-216ENST00000497809 TRMT2BQ96GJ1 504 aaKnown RBP8.9□□□□□ -0.99
NEB-216ENST00000497809 GPR101Q96P66 508 aaPredicted RBP8.9□□□□□ -0.99
NEB-216ENST00000497809 CAAP1Q9H8G2 361 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 STRIP2Q9ULQ0 834 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 GTF2A1LQ9UNN4 478 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 IPPQ9Y573 584 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 GJA3Q9Y6H8 435 aa8.9□□□□□ -0.99
NEB-216ENST00000497809 PPM1FP49593 454 aaPredicted RBP8.89□□□□□ -0.99
NEB-216ENST00000497809 FAM160A1Q05DH4 1040 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 MTMR1Q13613 665 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 SEPT6Q14141 434 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 CT47A1Q5JQC4 288 aaPredicted RBP8.89□□□□□ -0.99
NEB-216ENST00000497809 COX20Q5RI15 118 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 MAGEB6Q8N7X4 407 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 JMYQ8N9B5 988 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 THAP3Q8WTV1 239 aaPredicted RBP8.89□□□□□ -0.99
NEB-216ENST00000497809 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
NEB-216ENST00000497809 TATDN2Q93075 761 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 HOOK2Q96ED9 719 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 MFSD3Q96ES6 412 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 PFDN2Q9UHV9 154 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 MAPK8IP1Q9UQF2 711 aa8.89□□□□□ -0.99
NEB-216ENST00000497809 PDE8AO60658 829 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 TRIM37O94972 964 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 SLC34A2O95436 690 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 USPL1Q5W0Q7 1092 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 NXNQ6DKJ4 435 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 ZSCAN30Q86W11 494 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 CPLX3Q8WVH0 158 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 SELENOOQ9BVL4 669 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 CCDC8Q9H0W5 538 aaPredicted RBP8.88□□□□□ -0.99
NEB-216ENST00000497809 SH3BP1Q9Y3L3 701 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 PGRP06401 933 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 CCDC81Q6ZN84 652 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 NIM1KQ8IY84 436 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 PPHLN1Q8NEY8 458 aaKnown RBP8.88□□□□□ -0.99
NEB-216ENST00000497809 FBXO41Q8TF61 875 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 JPH3Q8WXH2 748 aaPredicted RBP8.88□□□□□ -0.99
NEB-216ENST00000497809 SKA1Q96BD8 255 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 HDAC5Q9UQL6 1122 aa8.88□□□□□ -0.99
NEB-216ENST00000497809 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 VSTM5A8MXK1 200 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 M0R2N6 131 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 HTR3AP46098 478 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 SETDB1Q15047 1291 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 C1orf53Q5VUE5 145 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 KRT77Q7Z794 578 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 CLASRPQ8N2M8 674 aaKnown RBP8.87□□□□□ -0.99
NEB-216ENST00000497809 SHDQ96IW2 340 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 MPP4Q96JB8 637 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
NEB-216ENST00000497809 USP25Q9UHP3 1055 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms