RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	BAG4	O95429	457 aa	Known RBP	11.18	□□□□□ -0.62
VIT-208	ENST00000497382	WASHC5	Q12768	1159 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	GRIK3	Q13003	919 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	PTPRO	Q16827	1216 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	SYT10	Q6XYQ8	523 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	SPACA7	Q96KW9	195 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	ADGRL3	Q9HAR2	1447 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.18	□□□□□ -0.62
VIT-208	ENST00000497382	CTNNA3	Q9UI47	895 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	SERPINA10	Q9UK55	444 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	TMCC3	Q9ULS5	477 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	ADGRL2	O95490	1459 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	PRPH	P41219	470 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	MAGEA9	P43362	315 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	GJA8	P48165	433 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.18	□□□□□ -0.62
VIT-208	ENST00000497382	LMNTD2	Q8IXW0	634 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	RNF214	Q8ND24	703 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	ZNF483	Q8TF39	744 aa	Predicted RBP	11.18	□□□□□ -0.62
VIT-208	ENST00000497382	CCDC102A	Q96A19	550 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	VMP1	Q96GC9	406 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	NACA2	Q9H009	215 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	TRPV5	Q9NQA5	729 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	TBC1D7	Q9P0N9	293 aa		11.18	□□□□□ -0.62
VIT-208	ENST00000497382	MARF1	Q9Y4F3	1742 aa	Known RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	ZSCAN9	O15535	394 aa	Predicted RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	SASH1	O94885	1247 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	SNUPN	O95149	360 aa	Known RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	FMNL1	O95466	1100 aa	Predicted RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	MYCLP1	P12525	358 aa	Predicted RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	CLK1	P49759	484 aa	Known RBP	11.17	□□□□□ -0.62
VIT-208	ENST00000497382	KANK3	Q6NY19	840 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	MMS22L	Q6ZRQ5	1243 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	CCDC186	Q7Z3E2	898 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	FILIP1	Q7Z7B0	1213 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	TXLNB	Q8N3L3	684 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	CHCHD4	Q8N4Q1	142 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	USP21	Q9UK80	565 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	IQGAP3	Q86VI3	1631 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	NAIP	Q13075	1403 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	MME	P08473	750 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	ENPP1	P22413	925 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	DRC7	Q8IY82	874 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	STAG1	Q8WVM7	1258 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	DHRS1	Q96LJ7	313 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	TRAK1	Q9UPV9	953 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	SLC45A1	Q9Y2W3	748 aa		11.17	□□□□□ -0.62
VIT-208	ENST00000497382	PTPRU	Q92729	1446 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	KCTD2	Q14681	263 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	DBN1	Q16643	649 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	ALDH1L2	Q3SY69	923 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	PREPL	Q4J6C6	727 aa	Predicted RBP	11.16	□□□□□ -0.62
VIT-208	ENST00000497382	SPATA7	Q9P0W8	599 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	TPP2	P29144	1249 aa	Predicted RBP	11.16	□□□□□ -0.62
VIT-208	ENST00000497382	FLII	Q13045	1269 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	PACS2	Q86VP3	889 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	PLPP6	Q8IY26	295 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	ARMC2	Q8NEN0	867 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	MPP4	Q96JB8	637 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382	CHMP5	Q9NZZ3	219 aa		11.16	□□□□□ -0.62
VIT-208	ENST00000497382		U3KPZ7	1027 aa	Predicted RBP	11.16	□□□□□ -0.62
VIT-208	ENST00000497382	RNF123	Q5XPI4	1314 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	PPP2R5B	Q15173	497 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	SYCP1	Q15431	976 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	SFMBT2	Q5VUG0	894 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	ARMC3	Q5W041	872 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
VIT-208	ENST00000497382	TEX11	Q8IYF3	940 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	DNAAF4	Q8WXU2	420 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	FAM163A	Q96GL9	167 aa	Predicted RBP	11.15	□□□□□ -0.62
VIT-208	ENST00000497382	HOXA10	P31260	410 aa	Predicted RBP	11.15	□□□□□ -0.62
VIT-208	ENST00000497382	NASP	P49321	788 aa	Predicted RBP	11.15	□□□□□ -0.62
VIT-208	ENST00000497382	NT5DC4	Q86YG4	428 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	LMCD1	Q9NZU5	365 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	TMEM98	Q9Y2Y6	226 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	GJA3	Q9Y6H8	435 aa		11.15	□□□□□ -0.62
VIT-208	ENST00000497382	MYO1B	O43795	1136 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	CD53	P19397	219 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	PRIM1	P49642	420 aa	Known RBP	11.14	□□□□□ -0.63
VIT-208	ENST00000497382	NAALADL2	Q58DX5	795 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.14	□□□□□ -0.63
VIT-208	ENST00000497382	PCGF5	Q86SE9	256 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	TSC1	Q92574	1164 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	IL17RA	Q96F46	866 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.14	□□□□□ -0.63
VIT-208	ENST00000497382	SOS2	Q07890	1332 aa	Predicted RBP	11.14	□□□□□ -0.63
VIT-208	ENST00000497382	USP5	P45974	858 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	SRL	Q86TD4	932 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	SIN3A	Q96ST3	1273 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	TRIM6	Q9C030	488 aa	Predicted RBP	11.14	□□□□□ -0.63
VIT-208	ENST00000497382	ODF2L	Q9ULJ1	636 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	NRXN3	Q9Y4C0	1643 aa		11.14	□□□□□ -0.63
VIT-208	ENST00000497382	GOLGA2	Q08379	1002 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	PDAP1	Q13442	181 aa	Known RBP	11.13	□□□□□ -0.63
VIT-208	ENST00000497382	PKN1	Q16512	942 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	FAM81B	Q96LP2	452 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	SLC7A5P2	Q9GIP4	190 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	NALCN	Q8IZF0	1738 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	SOS1	Q07889	1333 aa	Predicted RBP	11.13	□□□□□ -0.63
VIT-208	ENST00000497382	PECAM1	P16284	738 aa	Predicted RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms