RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
GGPS1-208ENST00000497327 SEPT3Q9UH03 358 aa8.5□□□□□ -1.05
GGPS1-208ENST00000497327 F8W735 103 aaPredicted RBP8.49□□□□□ -1.05
GGPS1-208ENST00000497327 TM4SF5O14894 197 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 ALX3O95076 343 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 ATP2B4P23634 1241 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 Q6ZS46 218 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
GGPS1-208ENST00000497327 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 ZFP64Q9NPA5 681 aa8.49□□□□□ -1.05
GGPS1-208ENST00000497327 KIF4AO95239 1232 aa8.48□□□□□ -1.05
GGPS1-208ENST00000497327 HYAL2Q12891 473 aa8.48□□□□□ -1.05
GGPS1-208ENST00000497327 MAP4K3Q8IVH8 894 aa8.48□□□□□ -1.05
GGPS1-208ENST00000497327 ABTB2Q8N961 1025 aa8.48□□□□□ -1.05
GGPS1-208ENST00000497327 GRIN2BQ13224 1484 aa8.47□□□□□ -1.05
GGPS1-208ENST00000497327 CYP2E1P05181 493 aaPredicted RBP8.47□□□□□ -1.05
GGPS1-208ENST00000497327 PRR23CQ6ZRP0 262 aa8.47□□□□□ -1.05
GGPS1-208ENST00000497327 CACTIN-AS1Q8N1I8 211 aa8.47□□□□□ -1.05
GGPS1-208ENST00000497327 GALNT11Q8NCW6 608 aa8.47□□□□□ -1.05
GGPS1-208ENST00000497327 SERPINA10Q9UK55 444 aa8.47□□□□□ -1.05
GGPS1-208ENST00000497327 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
GGPS1-208ENST00000497327 LRP8Q14114 963 aa8.46□□□□□ -1.06
GGPS1-208ENST00000497327 ATCAYQ86WG3 371 aa8.46□□□□□ -1.06
GGPS1-208ENST00000497327 CCDC97Q96F63 343 aaPredicted RBP8.46□□□□□ -1.06
GGPS1-208ENST00000497327 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
GGPS1-208ENST00000497327 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
GGPS1-208ENST00000497327 PPME1Q9Y570 386 aa8.46□□□□□ -1.06
GGPS1-208ENST00000497327 CEP162Q5TB80 1403 aa8.46□□□□□ -1.06
GGPS1-208ENST00000497327 SCNN1AP37088 669 aa8.45□□□□□ -1.06
GGPS1-208ENST00000497327 TTC39BQ5VTQ0 682 aaPredicted RBP8.45□□□□□ -1.06
GGPS1-208ENST00000497327 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
GGPS1-208ENST00000497327 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
GGPS1-208ENST00000497327 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
GGPS1-208ENST00000497327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.45□□□□□ -1.06
GGPS1-208ENST00000497327 FHAD1B1AJZ9 1412 aa8.45□□□□□ -1.06
GGPS1-208ENST00000497327 CUL7Q14999 1698 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 ARID3CA6NKF2 412 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 WISP1O95388 367 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 CEP135Q66GS9 1140 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
GGPS1-208ENST00000497327 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.06
GGPS1-208ENST00000497327 CEP120Q8N960 986 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
GGPS1-208ENST00000497327 HYAL3O43820 417 aaPredicted RBP8.43□□□□□ -1.06
GGPS1-208ENST00000497327 TXNDC11Q6PKC3 985 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 HELQQ8TDG4 1101 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 PBX4Q9BYU1 374 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 KCNK4Q9NYG8 393 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
GGPS1-208ENST00000497327 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06
GGPS1-208ENST00000497327 CDC27P30260 824 aa8.42□□□□□ -1.06
GGPS1-208ENST00000497327 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
GGPS1-208ENST00000497327 SPACA7Q96KW9 195 aa8.42□□□□□ -1.06
GGPS1-208ENST00000497327 RNF112Q9ULX5 631 aa8.42□□□□□ -1.06
GGPS1-208ENST00000497327 EIF4G3O43432 1585 aaKnown RBP8.42□□□□□ -1.06
GGPS1-208ENST00000497327 ADAMTS12P58397 1594 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 CLIP1P30622 1438 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 EPHA1P21709 976 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 XKR5Q6UX68 686 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 EDEM1Q92611 657 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 UBL7Q96S82 380 aaPredicted RBP8.41□□□□□ -1.06
GGPS1-208ENST00000497327 KANSL3Q9P2N6 904 aa8.41□□□□□ -1.06
GGPS1-208ENST00000497327 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 MAGI1Q96QZ7 1491 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-208ENST00000497327 ACPPP15309 386 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 FSTP19883 344 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 POP1Q99575 1024 aaKnown RBP8.4□□□□□ -1.06
GGPS1-208ENST00000497327 ADAM19Q9H013 955 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 SH2B1Q9NRF2 756 aaPredicted RBP8.4□□□□□ -1.06
GGPS1-208ENST00000497327 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
GGPS1-208ENST00000497327 PBRM1Q86U86 1689 aa8.4□□□□□ -1.07
GGPS1-208ENST00000497327 NFKBIEO00221 500 aa8.39□□□□□ -1.07
GGPS1-208ENST00000497327 PDGFAP04085 211 aa8.39□□□□□ -1.07
GGPS1-208ENST00000497327 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
GGPS1-208ENST00000497327 ZNF438Q7Z4V0 828 aa8.39□□□□□ -1.07
GGPS1-208ENST00000497327 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
GGPS1-208ENST00000497327 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
GGPS1-208ENST00000497327 A6NHS1 94 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 FSCN2O14926 492 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 ADAM11O75078 769 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 GLB1P16278 677 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 MPSTP25325 297 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 CDC25BP30305 580 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
GGPS1-208ENST00000497327 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 CHRDQ9H2X0 955 aa8.38□□□□□ -1.07
GGPS1-208ENST00000497327 PTPRAP18433 802 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 SSFA2P28290 1259 aa8.37□□□□□ -1.07
GGPS1-208ENST00000497327 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
GGPS1-208ENST00000497327 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
GGPS1-208ENST00000497327 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms