RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 CCDC85CA6NKD9 419 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 DIAPH1O60610 1272 aaKnown RBP2.52□□□□□ -2.01
UBR4-217ENST00000497018 LILRA1O75019 489 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 TNFRSF21O75509 655 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 ALDH1L1O75891 902 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 FGAP02671 866 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 NEFLP07196 543 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 BDNFP23560 247 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 CRKP46108 304 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 GIPRP48546 466 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 VEGFBP49765 207 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 SMTNP53814 917 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 TEAD4Q15561 434 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 CTC1Q2NKJ3 1217 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 C11orf91Q3C1V1 193 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 LINC01559Q495D7 138 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 TNNI3KQ59H18 835 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 SYCP2LQ5T4T6 812 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 FBXL19Q6PCT2 694 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 NXPE4Q6UWF7 544 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 XKR5Q6UX68 686 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 RNF180Q86T96 592 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 PPARGC1BQ86YN6 1023 aaKnown RBP2.52□□□□□ -2.01
UBR4-217ENST00000497018 SLITRK4Q8IW52 837 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 SYNPOQ8N3V7 929 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 PHC3Q8NDX5 983 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 GPR152Q8TDT2 470 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 SNX29Q8TEQ0 813 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 BAP1Q92560 729 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 ANAPC16Q96DE5 110 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 MFSD3Q96ES6 412 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 IFT43Q96FT9 208 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 KCTD15Q96SI1 283 aaPredicted RBP2.52□□□□□ -2.01
UBR4-217ENST00000497018 BCO2Q9BYV7 579 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 ASPSCR1Q9BZE9 553 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 CHRDQ9H2X0 955 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 SUV39H2Q9H5I1 410 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 ZFYVE28Q9HCC9 887 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 NPHS2Q9NP85 383 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 AVENQ9NQS1 362 aaPredicted RBP2.52□□□□□ -2.01
UBR4-217ENST00000497018 UBP1Q9NZI7 540 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 KLK14Q9P0G3 267 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 RGS17Q9UGC6 210 aaPredicted RBP2.52□□□□□ -2.01
UBR4-217ENST00000497018 TCEAL9Q9UHQ7 104 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 MAPK8IP1Q9UQF2 711 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 BCS1LQ9Y276 419 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 AXIN2Q9Y2T1 843 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 CD2APQ9Y5K6 639 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 KIAA0556O60303 1618 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 CEP170Q5SW79 1584 aa2.52□□□□□ -2.01
UBR4-217ENST00000497018 PRDM2Q13029 1718 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 POTEMA6NI47 508 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 GSG1L2A8MUP6 293 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 HMGB1P1B2RPK0 211 aaPredicted RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 ALG1L2C9J202 215 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 F6X3S4 739 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 CDK2AP1O14519 115 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 TLL1O43897 1013 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 CAND2O75155 1236 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 IL2RAP01589 272 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 POTEJP0CG39 1038 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 C1QTNF8P60827 252 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 IFRD2Q12894 506 aaPredicted RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 PWP1Q13610 501 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 GRM2Q14416 872 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 HLTFQ14527 1009 aaKnown RBP eCLIP2.51□□□□□ -2.01
UBR4-217ENST00000497018 PPP2R5AQ15172 486 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 TCEA2Q15560 299 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 TRIP4Q15650 581 aaPredicted RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 PRPF40BQ6NWY9 871 aaKnown RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 ADGRD1Q6QNK2 874 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 POTEGQ6S5H5 508 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 PODNQ7Z5L7 613 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 PCGF5Q86SE9 256 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 TREML1Q86YW5 311 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 WDR75Q8IWA0 830 aaKnown RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 GALNT12Q8IXK2 581 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 ALDH16A1Q8IZ83 802 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 CCDC24Q8N4L8 307 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 AFAP1L2Q8N4X5 818 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 SVIPQ8NHG7 77 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 WNT2BQ93097 391 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 MPHOSPH6Q99547 160 aaKnown RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 ARPC5LQ9BPX5 153 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 LRRC3Q9BY71 257 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 FHDC1Q9C0D6 1143 aaPredicted RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 PRDM10Q9NQV6 1147 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 SFMBT1Q9UHJ3 866 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 PPT2Q9UMR5 302 aa2.51□□□□□ -2.01
UBR4-217ENST00000497018 COL17A1Q9UMD9 1497 aaPredicted RBP2.51□□□□□ -2.01
UBR4-217ENST00000497018 WASHC2CQ9Y4E1 1318 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 SERTM1A2A2V5 107 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 CFAP69A5D8W1 941 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 UPK3BL1B0FP48 263 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 UPK3BL2E5RIL1 263 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 EXOC5O00471 708 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 AKAP10O43572 662 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 PLIN1O60240 522 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 TOM1O60784 492 aa2.5□□□□□ -2.01
UBR4-217ENST00000497018 WDHD1O75717 1129 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms