RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 BBOX1O75936 387 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 NTSR2O95665 410 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 IGKV5-2P06315 115 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 CENPBP07199 599 aaPredicted RBP7.63□□□□□ -1.19
HMGCL-206ENST00000496907 GSE1Q14687 1217 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 RPGRQ92834 1020 aaKnown RBP7.63□□□□□ -1.19
HMGCL-206ENST00000496907 RBM17Q96I25 401 aaKnown RBP7.63□□□□□ -1.19
HMGCL-206ENST00000496907 CRAMP1Q96RY5 1269 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 PLA2G12BQ9BX93 195 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 BCL2L13Q9BXK5 485 aa7.63□□□□□ -1.19
HMGCL-206ENST00000496907 TAF1DQ9H5J8 278 aaPredicted RBP7.63□□□□□ -1.19
HMGCL-206ENST00000496907 RIC1Q4ADV7 1423 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 UTYO14607 1347 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 UBN2Q6ZU65 1347 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 FAM177BA6PVY3 158 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 F6X3S4 739 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-206ENST00000496907 TRIM27P14373 513 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 HOXA10P31260 410 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-206ENST00000496907 CRY2Q49AN0 593 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 MAP1SQ66K74 1059 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-206ENST00000496907 DDX46Q7L014 1031 aaKnown RBP7.62□□□□□ -1.19
HMGCL-206ENST00000496907 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 FAM89AQ96GI7 184 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 HACL1Q9UJ83 578 aa7.62□□□□□ -1.19
HMGCL-206ENST00000496907 ABCC4O15439 1325 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 LTBP3Q9NS15 1303 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 THSD7BQ9C0I4 1608 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 UBTFL1P0CB47 393 aaPredicted RBP7.61□□□□□ -1.19
HMGCL-206ENST00000496907 SRGNP10124 158 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 EPHX2P34913 555 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 CWF19L2Q2TBE0 894 aaKnown RBP7.61□□□□□ -1.19
HMGCL-206ENST00000496907 CNTROBQ8N137 903 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 L3MBTL3Q96JM7 780 aaPredicted RBP7.61□□□□□ -1.19
HMGCL-206ENST00000496907 CDC5LQ99459 802 aaKnown RBP7.61□□□□□ -1.19
HMGCL-206ENST00000496907 DDX19BQ9UMR2 479 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 ADAMTSL1Q8N6G6 1762 aa7.61□□□□□ -1.19
HMGCL-206ENST00000496907 ZNF541Q9H0D2 1346 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 ECM2O94769 699 aaPredicted RBP7.6□□□□□ -1.19
HMGCL-206ENST00000496907 GNAI2P04899 355 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 CSF1RP07333 972 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 CCDC57Q2TAC2 916 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 PRPF40BQ6NWY9 871 aaKnown RBP7.6□□□□□ -1.19
HMGCL-206ENST00000496907 UBE3BQ7Z3V4 1068 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 PNMA8AQ86V59 439 aaPredicted RBP7.6□□□□□ -1.19
HMGCL-206ENST00000496907 NUTM1Q86Y26 1132 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 IFNL1Q8IU54 200 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 USP44Q9H0E7 712 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 VPS33BQ9H267 617 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 ARFGEF2Q9Y6D5 1785 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 CACNA1FO60840 1977 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 SCN7AQ01118 1682 aa7.6□□□□□ -1.19
HMGCL-206ENST00000496907 ANKRD18BA2A2Z9 1011 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 HCLS1P14317 486 aaPredicted RBP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 HOXB1P14653 301 aaPredicted RBP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 ECE1P42892 770 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 CASP7P55210 303 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 CTSWP56202 376 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 RPS8P62241 208 aaKnown RBP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 IFIT5Q13325 482 aaKnown RBP7.59□□□□□ -1.19
HMGCL-206ENST00000496907 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 SP8Q8IXZ3 490 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 SUPT20HQ8NEM7 779 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 TTLL11Q8NHH1 800 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 CLUAP1Q96AJ1 413 aa7.59□□□□□ -1.19
HMGCL-206ENST00000496907 RTL9Q8NET4 1388 aa7.59□□□□□ -1.2
HMGCL-206ENST00000496907 CEP290O15078 2479 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 IGHMBP2P38935 993 aaKnown RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 RRP1P56182 461 aaKnown RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 GRAPQ13588 217 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 MVPQ14764 893 aaKnown RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 RABL6Q3YEC7 729 aaPredicted RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 CCDC93Q567U6 631 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 TAF7LQ5H9L4 462 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 ANKRD18AQ8IVF6 992 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 RPAP2Q8IXW5 612 aaPredicted RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 TMEM57Q8N5G2 664 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 GRAPLQ8TC17 118 aaPredicted RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 MPHOSPH8Q99549 860 aa7.58□□□□□ -1.2
HMGCL-206ENST00000496907 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 MKI67P46013 3256 aaKnown RBP7.58□□□□□ -1.2
HMGCL-206ENST00000496907 HMMRO75330 724 aa7.57□□□□□ -1.2
HMGCL-206ENST00000496907 NBPF7P0C2Y1 421 aaPredicted RBP7.57□□□□□ -1.2
HMGCL-206ENST00000496907 HOXB3P14651 431 aaPredicted RBP7.57□□□□□ -1.2
HMGCL-206ENST00000496907 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
HMGCL-206ENST00000496907 LMBR1LQ6UX01 489 aa7.57□□□□□ -1.2
HMGCL-206ENST00000496907 ANKRD2Q9GZV1 360 aa7.57□□□□□ -1.2
HMGCL-206ENST00000496907 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
HMGCL-206ENST00000496907 ATP6V0A2Q9Y487 856 aa7.57□□□□□ -1.2
HMGCL-206ENST00000496907 TRPM7Q96QT4 1865 aa7.57□□□□□ -1.2
HMGCL-206ENST00000496907 CHRM1P11229 460 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-206ENST00000496907 ITGA6P23229 1130 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 LMOD1P29536 600 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-206ENST00000496907 FOXO4P98177 505 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms