RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CCDC26	Q8TAB7	109 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	RGS12	O14924	1447 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCDC189	A1A4V9	331 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CKAP4	Q07065	602 aa	Known RBP	9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	KARS	Q15046	597 aa	Known RBP	9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	YIPF3	Q9GZM5	350 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SAMM50	Q9Y512	469 aa		9.32	□□□□□ -0.92
CRNKL1-205	ENST00000496549	AP1G2	O75843	785 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	KCNJ6	P48051	423 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FOXR1	Q6PIV2	292 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ARFGAP2	Q8N6H7	521 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	DCTPP1	Q9H773	170 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CD248	Q9HCU0	757 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CFAP65	Q6ZU64	1925 aa	Known RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GCC2	Q8IWJ2	1684 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PPFIA3	O75145	1194 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	RAPGEF3	O95398	923 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	STK38	Q15208	465 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FSIP1	Q8NA03	581 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	THUMPD2	Q9BTF0	503 aa	Known RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	HOMER3	Q9NSC5	361 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LRRD1	A4D1F6	860 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	AP5Z1	O43299	807 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCZ1B	P86790	482 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCZ1	P86791	482 aa	Predicted RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MEX3C	Q5U5Q3	659 aa	Known RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ARHGAP45	Q92619	1136 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SPAG5	Q96R06	1193 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LARP6	Q9BRS8	491 aa	Known RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ABCB6	Q9NP58	842 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549		H3BQF6	201 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ABCD1	P33897	745 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SLC8A3	P57103	927 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PREPL	Q4J6C6	727 aa	Predicted RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	RCSD1	Q6JBY9	416 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	XPO4	Q9C0E2	1151 aa	Known RBP	9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	EPC1	Q9H2F5	836 aa		9.31	□□□□□ -0.92
CRNKL1-205	ENST00000496549	GOLGA8K	D6RF30	607 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	EXOC5	O00471	708 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SASH3	O75995	380 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MYBL2	P10244	700 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MXRA7	P84157	204 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	AKAP2	Q9Y2D5	859 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PPP2R2C	Q9Y2T4	447 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ABCC10	Q5T3U5	1492 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SLC3A2	P08195	630 aa	Known RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	NBPF7	P0C2Y1	421 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LMOD1	P29536	600 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ZNF569	Q5MCW4	686 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SYNE3	Q6ZMZ3	975 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FUCA2	Q9BTY2	467 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ZNHIT6	Q9NWK9	470 aa	Known RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CDK13	Q14004	1512 aa	Known RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MEFV	O15553	781 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	AK2	P54819	239 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LAMB3	Q13751	1172 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PARP9	Q8IXQ6	854 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.3	□□□□□ -0.92	6e-6	■■■■■ 48.1
CRNKL1-205	ENST00000496549	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	DACH1	Q9UI36	760 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	POLR3A	O14802	1390 aa	Predicted RBP	9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ATP10B	O94823	1461 aa		9.3	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PECAM1	P16284	738 aa	Predicted RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TMPO	P42166	694 aa	Known RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	HSP90AB2P	Q58FF8	381 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	HHAT	Q5VTY9	493 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TTC6	Q86TZ1	520 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TRIM58	Q8NG06	486 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TESK2	Q96S53	571 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	LZTFL1	Q9NQ48	299 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	IL16	Q14005	1332 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CREB3	O43889	395 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	RBM5	P52756	815 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	VPS53	Q5VIR6	699 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	E4F1	Q66K89	784 aa	Predicted RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	AMOTL1	Q8IY63	956 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MCM8	Q9UJA3	840 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CDC23	Q9UJX2	597 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ZBTB7B	O15156	539 aa	Predicted RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	PPP1R12B	O60237	982 aa	Predicted RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	DDR1	Q08345	913 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ANKS4B	Q8N8V4	417 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	ZKSCAN4	Q969J2	545 aa	Predicted RBP	9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	DTNBP1	Q96EV8	351 aa		9.29	□□□□□ -0.92
CRNKL1-205	ENST00000496549	MYO1F	O00160	1098 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	FOSB	P53539	338 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SF3B2	Q13435	895 aa	Known RBP	9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	CCDC57	Q2TAC2	916 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TRIM74	Q86UV6	250 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	TRIM73	Q86UV7	250 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	THOC1	Q96FV9	657 aa	Known RBP	9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	IQCG	Q9H095	443 aa	Known RBP	9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	VCX	Q9H320	206 aa		9.28	□□□□□ -0.92
CRNKL1-205	ENST00000496549	KDM5D	Q9BY66	1539 aa		9.28	□□□□□ -0.92

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