RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 COA1Q9GZY4 146 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 PCDHB15Q9Y5E8 787 aa10.13□□□□□ -0.79
SMARCD3-215ENST00000496530 COL4A1P02462 1669 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 H7C1D1 291 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 RAD17O75943 681 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 RPS12P25398 132 aaKnown RBP10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 CXCL9Q07325 125 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 AAMPQ13685 434 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 METTL24Q5JXM2 366 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 ZNF804AQ7Z570 1209 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 SLC51AQ86UW1 340 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 LDHDQ86WU2 507 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 FBXW7Q969H0 707 aa10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 ZNF594Q96JF6 807 aaPredicted RBP10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 TAF1DQ9H5J8 278 aaPredicted RBP10.12□□□□□ -0.79
SMARCD3-215ENST00000496530 GOLGB1Q14789 3259 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 HMMRO75330 724 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 UBE4AQ14139 1066 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 POTEHQ6S545 545 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 USP50Q70EL3 339 aaPredicted RBP10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 VPS37DQ86XT2 251 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 DPF2Q92785 391 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 GPR101Q96P66 508 aaPredicted RBP10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 ADARB2Q9NS39 739 aaKnown RBP10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 COL4A5P29400 1685 aa10.11□□□□□ -0.79
SMARCD3-215ENST00000496530 MYO3BQ8WXR4 1341 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 POTECB2RU33 542 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 PSMD14O00487 310 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 TAF5LO75529 589 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 SURF6O75683 361 aaKnown RBP10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 IGHDP01880 384 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 HSPA6P17066 643 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 G3BP1Q13283 466 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 ANKRD44Q8N8A2 993 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 HELBQ8NG08 1087 aaPredicted RBP10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 KAZALD1Q96I82 304 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 GPRC5DQ9NZD1 345 aa10.1□□□□□ -0.79
SMARCD3-215ENST00000496530 EYA2O00167 538 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 FRAT2O75474 233 aaPredicted RBP10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 IFIT1P09914 478 aaKnown RBP10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 GMPSP49915 693 aaPredicted RBP10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 MMP14P50281 582 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 SCNN1DP51172 638 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 APLP1P51693 650 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 CEP85Q6P2H3 762 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 C15orf52Q6ZUT6 534 aaKnown RBP10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 AGBL3Q8NEM8 1001 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 SIL1Q9H173 461 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 CNOT7Q9UIV1 285 aaKnown RBP10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 A0A1B0GUL6 1792 aa10.09□□□□□ -0.79
SMARCD3-215ENST00000496530 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 CIAO1O76071 339 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 PDE8BO95263 885 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 VIL1P09327 827 aaKnown RBP10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 SLC5A1P13866 664 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 IL15P40933 162 aaPredicted RBP10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 EPS15P42566 896 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 STRIP1Q5VSL9 837 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 TTLL5Q6EMB2 1281 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 KLHDC4Q8TBB5 520 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 CD209Q9NNX6 404 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 CEP126Q9P2H0 1117 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 RIPOR2Q9Y4F9 1068 aa10.08□□□□□ -0.8
SMARCD3-215ENST00000496530 PSME4Q14997 1843 aa10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 HIBADHP31937 336 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 LRRC24Q50LG9 513 aa10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 PUS3Q9BZE2 481 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 AKAP2Q9Y2D5 859 aa10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
SMARCD3-215ENST00000496530 USP17L8P0C7I0 530 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 RFX5P48382 616 aaPredicted RBP10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 GTF2IP78347 998 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 MTX1Q13505 466 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 LPIN2Q92539 896 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 ZNF609O15014 1411 aa10.06□□□□□ -0.8
SMARCD3-215ENST00000496530 IL1R1P14778 569 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms