RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 A0A1B0GUL7 405 aa22.59■■□□□ 1.21
TSSC4-210ENST00000496468 PPIP5K2O43314 1243 aa22.59■■□□□ 1.21
TSSC4-210ENST00000496468 KLRK1P26718 216 aa22.59■■□□□ 1.21
TSSC4-210ENST00000496468 WTIPA6NIX2 430 aaPredicted RBP22.58■■□□□ 1.21
TSSC4-210ENST00000496468 IARSP41252 1262 aaKnown RBP22.58■■□□□ 1.21
TSSC4-210ENST00000496468 AOC3Q16853 763 aa22.58■■□□□ 1.21
TSSC4-210ENST00000496468 WASHC4Q2M389 1173 aa22.58■■□□□ 1.21
TSSC4-210ENST00000496468 CLASRPQ8N2M8 674 aaKnown RBP22.58■■□□□ 1.21
TSSC4-210ENST00000496468 BCL11AQ9H165 835 aa22.58■■□□□ 1.21
TSSC4-210ENST00000496468 SBF1O95248 1867 aa22.58■■□□□ 1.2
TSSC4-210ENST00000496468 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 UTRNP46939 3433 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 SMARCA5O60264 1052 aaPredicted RBP22.57■■□□□ 1.2
TSSC4-210ENST00000496468 KIAA2012Q0VF49 1180 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 CENPQQ7L2Z9 268 aaPredicted RBP22.57■■□□□ 1.2
TSSC4-210ENST00000496468 AACSQ86V21 672 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 ZC3H12CQ9C0D7 883 aaKnown RBP22.57■■□□□ 1.2
TSSC4-210ENST00000496468 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 DICER1Q9UPY3 1922 aaKnown RBP22.57■■□□□ 1.2
TSSC4-210ENST00000496468 IRS2Q9Y4H2 1338 aa22.57■■□□□ 1.2
TSSC4-210ENST00000496468 COL4A5P29400 1685 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 RIMBP2O15034 1052 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 LMNB1P20700 586 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 C15orf52Q6ZUT6 534 aaKnown RBP22.56■■□□□ 1.2
TSSC4-210ENST00000496468 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 NEUROD6Q96NK8 337 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 VPS33BQ9H267 617 aa22.56■■□□□ 1.2
TSSC4-210ENST00000496468 ANKRD45Q5TZF3 282 aa22.55■■□□□ 1.2
TSSC4-210ENST00000496468 ZNF804AQ7Z570 1209 aa22.55■■□□□ 1.2
TSSC4-210ENST00000496468 MYH13Q9UKX3 1938 aa22.55■■□□□ 1.2
TSSC4-210ENST00000496468 IFIT2P09913 472 aaKnown RBP22.54■■□□□ 1.2
TSSC4-210ENST00000496468 ADORA1P30542 326 aa22.54■■□□□ 1.2
TSSC4-210ENST00000496468 TIMM10P62072 90 aa22.54■■□□□ 1.2
TSSC4-210ENST00000496468 CAVIN4Q5BKX8 364 aa22.54■■□□□ 1.2
TSSC4-210ENST00000496468 TXNRD3Q86VQ6 643 aa22.54■■□□□ 1.2
TSSC4-210ENST00000496468 VPS37DQ86XT2 251 aa22.54■■□□□ 1.2
TSSC4-210ENST00000496468 EAF2Q96CJ1 260 aaPredicted RBP22.54■■□□□ 1.2
TSSC4-210ENST00000496468 G3V3G9 751 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 GYG1P46976 350 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 PRELPP51888 382 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 DCAF8Q5TAQ9 597 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 XAGE2Q96GT9 111 aa22.53■■□□□ 1.2
TSSC4-210ENST00000496468 TLR7Q9NYK1 1049 aaKnown RBP22.53■■□□□ 1.2
TSSC4-210ENST00000496468 DBNLQ9UJU6 430 aaKnown RBP22.53■■□□□ 1.2
TSSC4-210ENST00000496468 NUCB1Q02818 461 aa22.52■■□□□ 1.2
TSSC4-210ENST00000496468 GORABQ5T7V8 394 aa22.52■■□□□ 1.2
TSSC4-210ENST00000496468 DBNDD2Q9BQY9 259 aa22.52■■□□□ 1.2
TSSC4-210ENST00000496468 CCDC8Q9H0W5 538 aaPredicted RBP22.52■■□□□ 1.2
TSSC4-210ENST00000496468 RNF181Q9P0P0 153 aa22.52■■□□□ 1.2
TSSC4-210ENST00000496468 ECE2O60344 883 aa22.51■■□□□ 1.19
TSSC4-210ENST00000496468 HIBADHP31937 336 aaKnown RBP22.51■■□□□ 1.19
TSSC4-210ENST00000496468 JDP2Q8WYK2 163 aa22.51■■□□□ 1.19
TSSC4-210ENST00000496468 LNPKQ9C0E8 428 aa22.51■■□□□ 1.19
TSSC4-210ENST00000496468 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
TSSC4-210ENST00000496468 DBNDD1Q9H9R9 158 aa22.51■■□□□ 1.19
TSSC4-210ENST00000496468 DOK7Q18PE1 504 aa22.5■■□□□ 1.19
TSSC4-210ENST00000496468 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
TSSC4-210ENST00000496468 FAM84BQ96KN1 310 aaPredicted RBP22.5■■□□□ 1.19
TSSC4-210ENST00000496468 PSME4Q14997 1843 aa22.5■■□□□ 1.19
TSSC4-210ENST00000496468 PHKA1P46020 1223 aa22.49■■□□□ 1.19
TSSC4-210ENST00000496468 BCAMP50895 628 aa22.49■■□□□ 1.19
TSSC4-210ENST00000496468 C9orf131Q5VYM1 1079 aa22.49■■□□□ 1.19
TSSC4-210ENST00000496468 CCDC102BQ68D86 513 aa22.49■■□□□ 1.19
TSSC4-210ENST00000496468 GPATCH3Q96I76 525 aa22.49■■□□□ 1.19
TSSC4-210ENST00000496468 CCDC158Q5M9N0 1113 aa22.48■■□□□ 1.19
TSSC4-210ENST00000496468 TTC39AQ5SRH9 613 aa22.48■■□□□ 1.19
TSSC4-210ENST00000496468 FBXO33Q7Z6M2 555 aa22.48■■□□□ 1.19
TSSC4-210ENST00000496468 CD209Q9NNX6 404 aa22.48■■□□□ 1.19
TSSC4-210ENST00000496468 GNL3LQ9NVN8 582 aaKnown RBP22.48■■□□□ 1.19
TSSC4-210ENST00000496468 SCN9AQ15858 1988 aa22.48■■□□□ 1.19
TSSC4-210ENST00000496468 GTF3C3Q9Y5Q9 886 aa22.47■■□□□ 1.19
TSSC4-210ENST00000496468 ZNF646O15015 1829 aaPredicted RBP22.47■■□□□ 1.19
TSSC4-210ENST00000496468 CHD4Q14839 1912 aa22.47■■□□□ 1.19
TSSC4-210ENST00000496468 COL1A1P02452 1464 aaPredicted RBP22.47■■□□□ 1.19
TSSC4-210ENST00000496468 FRAT2O75474 233 aaPredicted RBP22.46■■□□□ 1.19
TSSC4-210ENST00000496468 IL1R1P14778 569 aa22.46■■□□□ 1.19
TSSC4-210ENST00000496468 PODNQ7Z5L7 613 aa22.46■■□□□ 1.19
TSSC4-210ENST00000496468 ZNRF3Q9ULT6 936 aa22.46■■□□□ 1.19
TSSC4-210ENST00000496468 YDJCA8MPS7 323 aa22.45■■□□□ 1.18
TSSC4-210ENST00000496468 UQCRFS1P1P0C7P4 283 aa22.45■■□□□ 1.18
TSSC4-210ENST00000496468 ARID4AP29374 1257 aaPredicted RBP22.45■■□□□ 1.18
TSSC4-210ENST00000496468 OTUD7AQ8TE49 926 aaPredicted RBP22.45■■□□□ 1.18
TSSC4-210ENST00000496468 IQSEC3Q9UPP2 1182 aaPredicted RBP22.45■■□□□ 1.18
TSSC4-210ENST00000496468 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
TSSC4-210ENST00000496468 MX1P20591 662 aa22.44■■□□□ 1.18
TSSC4-210ENST00000496468 TDRD7Q8NHU6 1098 aaKnown RBP22.44■■□□□ 1.18
TSSC4-210ENST00000496468 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
TSSC4-210ENST00000496468 SALL3Q9BXA9 1300 aa22.43■■□□□ 1.18
TSSC4-210ENST00000496468 FZD9O00144 591 aa22.43■■□□□ 1.18
TSSC4-210ENST00000496468 SEMA3EO15041 775 aa22.43■■□□□ 1.18
TSSC4-210ENST00000496468 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
TSSC4-210ENST00000496468 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
TSSC4-210ENST00000496468 C16orf71Q8IYS4 520 aaPredicted RBP22.43■■□□□ 1.18
TSSC4-210ENST00000496468 ECHDC1Q9NTX5 307 aa22.43■■□□□ 1.18
TSSC4-210ENST00000496468 TTC41PQ6P2S7 1318 aa22.42■■□□□ 1.18
TSSC4-210ENST00000496468 ZNF541Q9H0D2 1346 aa22.42■■□□□ 1.18
TSSC4-210ENST00000496468 CHAF1AQ13111 956 aaPredicted RBP22.42■■□□□ 1.18
TSSC4-210ENST00000496468 DENND2AQ9ULE3 1009 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms