RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CASP7P55210 303 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
CXCL12-208ENST00000496375 USP17L1Q7RTZ2 530 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 LINS1Q8NG48 757 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 GMLQ99445 158 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 PLA2G12BQ9BX93 195 aa18.33■□□□□ 0.52
CXCL12-208ENST00000496375 GBA2Q9HCG7 927 aaPredicted RBP18.33■□□□□ 0.52
CXCL12-208ENST00000496375 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
CXCL12-208ENST00000496375 ITGA6P23229 1130 aa18.32■□□□□ 0.52
CXCL12-208ENST00000496375 SCARF1Q14162 830 aa18.32■□□□□ 0.52
CXCL12-208ENST00000496375 FAM161AQ3B820 660 aa18.32■□□□□ 0.52
CXCL12-208ENST00000496375 C2orf69Q8N8R5 385 aa18.32■□□□□ 0.52
CXCL12-208ENST00000496375 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-208ENST00000496375 CA12O43570 354 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 NOGQ13253 232 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
CXCL12-208ENST00000496375 RGMBQ6NW40 437 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 MYOZ2Q9NPC6 264 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
CXCL12-208ENST00000496375 CSF1RP07333 972 aa18.3■□□□□ 0.52
CXCL12-208ENST00000496375 FBXW7Q969H0 707 aa18.3■□□□□ 0.52
CXCL12-208ENST00000496375 ZIC5Q96T25 663 aa18.3■□□□□ 0.52
CXCL12-208ENST00000496375 MPHOSPH8Q99549 860 aa18.3■□□□□ 0.52
CXCL12-208ENST00000496375 ZNF646O15015 1829 aaPredicted RBP18.29■□□□□ 0.52
CXCL12-208ENST00000496375 DACT2Q5SW24 774 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 TXNRD3Q86VQ6 643 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 ABHD8Q96I13 439 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 MXD3Q9BW11 206 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 ANKRD2Q9GZV1 360 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 COA1Q9GZY4 146 aa18.29■□□□□ 0.52
CXCL12-208ENST00000496375 ZNF804BA4D1E1 1349 aa18.28■□□□□ 0.52
CXCL12-208ENST00000496375 FAM155AB1AL88 458 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-208ENST00000496375 F6X3S4 739 aa18.28■□□□□ 0.52
CXCL12-208ENST00000496375 ZNF157P51786 506 aaPredicted RBP18.28■□□□□ 0.52
CXCL12-208ENST00000496375 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.52
CXCL12-208ENST00000496375 E9PSI1 815 aa18.27■□□□□ 0.52
CXCL12-208ENST00000496375 KLRK1P26718 216 aa18.27■□□□□ 0.52
CXCL12-208ENST00000496375 STRIP1Q5VSL9 837 aa18.27■□□□□ 0.52
CXCL12-208ENST00000496375 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.52
CXCL12-208ENST00000496375 CCDC102AQ96A19 550 aa18.27■□□□□ 0.52
CXCL12-208ENST00000496375 PITPNM2Q9BZ72 1349 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 CASP8AP2Q9UKL3 1982 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 KCNJ4P48050 445 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 CHRNDQ07001 517 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
CXCL12-208ENST00000496375 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
CXCL12-208ENST00000496375 MYO3BQ8WXR4 1341 aa18.25■□□□□ 0.51
CXCL12-208ENST00000496375 FOXO4P98177 505 aa18.25■□□□□ 0.51
CXCL12-208ENST00000496375 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
CXCL12-208ENST00000496375 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
CXCL12-208ENST00000496375 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
CXCL12-208ENST00000496375 SLC10A3P09131 477 aa18.24■□□□□ 0.51
CXCL12-208ENST00000496375 KIF23Q02241 960 aaPredicted RBP18.24■□□□□ 0.51
CXCL12-208ENST00000496375 IFIT5Q13325 482 aaKnown RBP18.24■□□□□ 0.51
CXCL12-208ENST00000496375 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
CXCL12-208ENST00000496375 PAPPA2Q9BXP8 1791 aa18.23■□□□□ 0.51
CXCL12-208ENST00000496375 SNAP23O00161 211 aa18.23■□□□□ 0.51
CXCL12-208ENST00000496375 GTF2IP78347 998 aa18.23■□□□□ 0.51
CXCL12-208ENST00000496375 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
CXCL12-208ENST00000496375 WNT10BO00744 389 aa18.22■□□□□ 0.51
CXCL12-208ENST00000496375 TAF5LO75529 589 aa18.22■□□□□ 0.51
CXCL12-208ENST00000496375 FKBP1BP68106 108 aa18.22■□□□□ 0.51
CXCL12-208ENST00000496375 LMBR1LQ6UX01 489 aa18.22■□□□□ 0.51
CXCL12-208ENST00000496375 HELBQ8NG08 1087 aaPredicted RBP18.22■□□□□ 0.51
CXCL12-208ENST00000496375 GRM8O00222 908 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 SASH1O94885 1247 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 EPHA10Q5JZY3 1008 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 PRAMEF18Q5VWM3 479 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 MOB2Q70IA6 237 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 IRS2Q9Y4H2 1338 aa18.21■□□□□ 0.51
CXCL12-208ENST00000496375 MMP14P50281 582 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 HNRNPUQ00839 825 aaKnown RBP eCLIP18.2■□□□□ 0.5
CXCL12-208ENST00000496375 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 SAGE1Q9NXZ1 904 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
CXCL12-208ENST00000496375 HDAC9Q9UKV0 1011 aa18.2■□□□□ 0.5
CXCL12-208ENST00000496375 CCDC85CA6NKD9 419 aa18.19■□□□□ 0.5
CXCL12-208ENST00000496375 C15orf52Q6ZUT6 534 aaKnown RBP18.19■□□□□ 0.5
CXCL12-208ENST00000496375 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
CXCL12-208ENST00000496375 ZNF594Q96JF6 807 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-208ENST00000496375 CSRNP1Q96S65 589 aa18.19■□□□□ 0.5
CXCL12-208ENST00000496375 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
CXCL12-208ENST00000496375 MCOLN1Q9GZU1 580 aa18.19■□□□□ 0.5
CXCL12-208ENST00000496375 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
CXCL12-208ENST00000496375 TRPA1O75762 1119 aa18.18■□□□□ 0.5
CXCL12-208ENST00000496375 ALDH1L1O75891 902 aa18.18■□□□□ 0.5
CXCL12-208ENST00000496375 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
CXCL12-208ENST00000496375 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
CXCL12-208ENST00000496375 PLIN1O60240 522 aa18.17■□□□□ 0.5
CXCL12-208ENST00000496375 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms