RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 USP17L4A6NCW7 530 aa18.21■□□□□ 0.51
PDAP1-204ENST00000496335 TBC1D10BQ4KMP7 808 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-204ENST00000496335 RBM26Q5T8P6 1007 aaKnown RBP18.21■□□□□ 0.51
PDAP1-204ENST00000496335 RSBN1LQ6PCB5 846 aaPredicted RBP18.21■□□□□ 0.51
PDAP1-204ENST00000496335 USP17L1Q7RTZ2 530 aa18.21■□□□□ 0.51
PDAP1-204ENST00000496335 COA1Q9GZY4 146 aa18.21■□□□□ 0.51
PDAP1-204ENST00000496335 CREBZFQ9NS37 354 aa18.21■□□□□ 0.51
PDAP1-204ENST00000496335 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
PDAP1-204ENST00000496335 TRAF5O00463 557 aa18.2■□□□□ 0.5
PDAP1-204ENST00000496335 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
PDAP1-204ENST00000496335 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
PDAP1-204ENST00000496335 ZNF646O15015 1829 aaPredicted RBP18.19■□□□□ 0.5
PDAP1-204ENST00000496335 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 AGBL3Q8NEM8 1001 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 KLHDC4Q8TBB5 520 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 ARHGAP45Q92619 1136 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
PDAP1-204ENST00000496335 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 GMLQ99445 158 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 PGAP2Q9UHJ9 254 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
PDAP1-204ENST00000496335 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
PDAP1-204ENST00000496335 TRPM7Q96QT4 1865 aa18.18■□□□□ 0.5
PDAP1-204ENST00000496335 PCNTO95613 3336 aa18.17■□□□□ 0.5
PDAP1-204ENST00000496335 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
PDAP1-204ENST00000496335 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
PDAP1-204ENST00000496335 DACT2Q5SW24 774 aa18.17■□□□□ 0.5
PDAP1-204ENST00000496335 C15orf52Q6ZUT6 534 aaKnown RBP18.17■□□□□ 0.5
PDAP1-204ENST00000496335 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
PDAP1-204ENST00000496335 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
PDAP1-204ENST00000496335 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
PDAP1-204ENST00000496335 RIPOR2Q9Y4F9 1068 aa18.17■□□□□ 0.5
PDAP1-204ENST00000496335 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
PDAP1-204ENST00000496335 TRIM27P14373 513 aa18.16■□□□□ 0.5
PDAP1-204ENST00000496335 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
PDAP1-204ENST00000496335 STRIP1Q5VSL9 837 aa18.16■□□□□ 0.5
PDAP1-204ENST00000496335 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
PDAP1-204ENST00000496335 MEIS3Q99687 375 aa18.16■□□□□ 0.5
PDAP1-204ENST00000496335 ZNF609O15014 1411 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 ZNF280AP59817 542 aaPredicted RBP18.15■□□□□ 0.5
PDAP1-204ENST00000496335 GTF2IP78347 998 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 TTLL5Q6EMB2 1281 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 DLK2Q6UY11 383 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
PDAP1-204ENST00000496335 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
PDAP1-204ENST00000496335 ASTN2O75129 1339 aaPredicted RBP18.15■□□□□ 0.5
PDAP1-204ENST00000496335 RFX5P48382 616 aaPredicted RBP18.14■□□□□ 0.49
PDAP1-204ENST00000496335 CST9Q5W186 159 aa18.14■□□□□ 0.49
PDAP1-204ENST00000496335 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
PDAP1-204ENST00000496335 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
PDAP1-204ENST00000496335 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
PDAP1-204ENST00000496335 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
PDAP1-204ENST00000496335 METTL24Q5JXM2 366 aa18.13■□□□□ 0.49
PDAP1-204ENST00000496335 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
PDAP1-204ENST00000496335 ZNF804AQ7Z570 1209 aa18.13■□□□□ 0.49
PDAP1-204ENST00000496335 MYOZ2Q9NPC6 264 aa18.13■□□□□ 0.49
PDAP1-204ENST00000496335 IL1R1P14778 569 aa18.12■□□□□ 0.49
PDAP1-204ENST00000496335 GYG1P46976 350 aa18.12■□□□□ 0.49
PDAP1-204ENST00000496335 PTPN12Q05209 780 aaKnown RBP18.12■□□□□ 0.49
PDAP1-204ENST00000496335 SCARF1Q14162 830 aa18.12■□□□□ 0.49
PDAP1-204ENST00000496335 ABT1Q9ULW3 272 aaKnown RBP18.12■□□□□ 0.49
PDAP1-204ENST00000496335 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
PDAP1-204ENST00000496335 CELF2O95319 508 aaKnown RBP18.11■□□□□ 0.49
PDAP1-204ENST00000496335 ZKSCAN2Q63HK3 967 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 VGLL2Q8N8G2 317 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 DCPSQ96C86 337 aaKnown RBP18.11■□□□□ 0.49
PDAP1-204ENST00000496335 FAM84BQ96KN1 310 aaPredicted RBP18.11■□□□□ 0.49
PDAP1-204ENST00000496335 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 GGA3Q9NZ52 723 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 JAG2Q9Y219 1238 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 MYO3BQ8WXR4 1341 aa18.11■□□□□ 0.49
PDAP1-204ENST00000496335 ADM5C9JUS6 153 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 EYA2O00167 538 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 PDE8BO95263 885 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 VEGFBP49765 207 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 CERS5Q8N5B7 392 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 SIL1Q9H173 461 aa18.1■□□□□ 0.49
PDAP1-204ENST00000496335 GNAI3P08754 354 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
PDAP1-204ENST00000496335 DEFB115Q30KQ5 88 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 NBPF9Q3BBW0 867 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 ANGEL2Q5VTE6 544 aaKnown RBP18.09■□□□□ 0.49
PDAP1-204ENST00000496335 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 HDAC5Q9UQL6 1122 aa18.09■□□□□ 0.49
PDAP1-204ENST00000496335 RASSF10A6NK89 507 aa18.08■□□□□ 0.48
PDAP1-204ENST00000496335 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.48
PDAP1-204ENST00000496335 SCAF8Q9UPN6 1271 aaKnown RBP18.08■□□□□ 0.48
PDAP1-204ENST00000496335 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.48
PDAP1-204ENST00000496335 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
PDAP1-204ENST00000496335 SASH1O94885 1247 aa18.07■□□□□ 0.48
PDAP1-204ENST00000496335 FBXO33Q7Z6M2 555 aa18.07■□□□□ 0.48
PDAP1-204ENST00000496335 SULF1Q8IWU6 871 aa18.07■□□□□ 0.48
PDAP1-204ENST00000496335 IQSEC3Q9UPP2 1182 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms