RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 RWDD1Q9H446 243 aaPredicted RBP18.2■□□□□ 0.5
HDAC9-226ENST00000496026 DBNDD1Q9H9R9 158 aa18.2■□□□□ 0.5
HDAC9-226ENST00000496026 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
HDAC9-226ENST00000496026 ECE2O60344 883 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 CAVIN4Q5BKX8 364 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 ZNF804AQ7Z570 1209 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 KIF1BPQ96EK5 621 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 COA1Q9GZY4 146 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 ZNRF3Q9ULT6 936 aa18.19■□□□□ 0.5
HDAC9-226ENST00000496026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.19■□□□□ 0.5
HDAC9-226ENST00000496026 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
HDAC9-226ENST00000496026 GYG1P46976 350 aa18.18■□□□□ 0.5
HDAC9-226ENST00000496026 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
HDAC9-226ENST00000496026 TIMM10P62072 90 aa18.18■□□□□ 0.5
HDAC9-226ENST00000496026 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
HDAC9-226ENST00000496026 NEUROD6Q96NK8 337 aa18.18■□□□□ 0.5
HDAC9-226ENST00000496026 FZD9O00144 591 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
HDAC9-226ENST00000496026 TNNI3KQ59H18 835 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 FPGT-TNNI3KV9GXZ4 949 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
HDAC9-226ENST00000496026 IRS2Q9Y4H2 1338 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 A0A1B0GUL6 1792 aa18.17■□□□□ 0.5
HDAC9-226ENST00000496026 COL4A5P29400 1685 aa18.16■□□□□ 0.5
HDAC9-226ENST00000496026 GORABQ5T7V8 394 aa18.16■□□□□ 0.5
HDAC9-226ENST00000496026 PODNQ7Z5L7 613 aa18.16■□□□□ 0.5
HDAC9-226ENST00000496026 FAM84BQ96KN1 310 aaPredicted RBP18.16■□□□□ 0.5
HDAC9-226ENST00000496026 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
HDAC9-226ENST00000496026 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
HDAC9-226ENST00000496026 ZNF609O15014 1411 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 YDJCA8MPS7 323 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 RAD17O75943 681 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 ADORA1P30542 326 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 BCAMP50895 628 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
HDAC9-226ENST00000496026 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 CD209Q9NNX6 404 aa18.15■□□□□ 0.5
HDAC9-226ENST00000496026 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
HDAC9-226ENST00000496026 SBF1O95248 1867 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
HDAC9-226ENST00000496026 IGHDP01880 384 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 FBXO33Q7Z6M2 555 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 AACSQ86V21 672 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 XAGE2Q96GT9 111 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 ZNF541Q9H0D2 1346 aa18.14■□□□□ 0.49
HDAC9-226ENST00000496026 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
HDAC9-226ENST00000496026 CXCL9Q07325 125 aa18.13■□□□□ 0.49
HDAC9-226ENST00000496026 TNIP1Q15025 636 aa18.13■□□□□ 0.49
HDAC9-226ENST00000496026 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
HDAC9-226ENST00000496026 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
HDAC9-226ENST00000496026 GNL3LQ9NVN8 582 aaKnown RBP18.13■□□□□ 0.49
HDAC9-226ENST00000496026 GJA3Q9Y6H8 435 aa18.13■□□□□ 0.49
HDAC9-226ENST00000496026 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
HDAC9-226ENST00000496026 IL1R1P14778 569 aa18.12■□□□□ 0.49
HDAC9-226ENST00000496026 YY1P25490 414 aa18.12■□□□□ 0.49
HDAC9-226ENST00000496026 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
HDAC9-226ENST00000496026 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
HDAC9-226ENST00000496026 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
HDAC9-226ENST00000496026 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
HDAC9-226ENST00000496026 USP17L3A6NCW0 530 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 USP17L4A6NCW7 530 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 GLTPD2A6NH11 291 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 PHKA1P46020 1223 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 GTF2IP78347 998 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 CCDC158Q5M9N0 1113 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 ANKRD45Q5TZF3 282 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 CCDC102BQ68D86 513 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 USP17L1Q7RTZ2 530 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 GPC2Q8N158 579 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
HDAC9-226ENST00000496026 DBNDD2Q9BQY9 259 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 CCDC88AQ3V6T2 1871 aa18.11■□□□□ 0.49
HDAC9-226ENST00000496026 PSMD14O00487 310 aa18.1■□□□□ 0.49
HDAC9-226ENST00000496026 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
HDAC9-226ENST00000496026 TTC39AQ5SRH9 613 aa18.1■□□□□ 0.49
HDAC9-226ENST00000496026 TTLL5Q6EMB2 1281 aa18.1■□□□□ 0.49
HDAC9-226ENST00000496026 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
HDAC9-226ENST00000496026 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
HDAC9-226ENST00000496026 CHD4Q14839 1912 aa18.1■□□□□ 0.49
HDAC9-226ENST00000496026 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
HDAC9-226ENST00000496026 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
HDAC9-226ENST00000496026 CHAF1AQ13111 956 aaPredicted RBP18.09■□□□□ 0.49
HDAC9-226ENST00000496026 STRIP1Q5VSL9 837 aa18.09■□□□□ 0.49
HDAC9-226ENST00000496026 B4GALNT3Q6L9W6 998 aa18.09■□□□□ 0.49
HDAC9-226ENST00000496026 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
HDAC9-226ENST00000496026 DBNLQ9UJU6 430 aaKnown RBP18.09■□□□□ 0.49
HDAC9-226ENST00000496026 VIL1P09327 827 aaKnown RBP18.08■□□□□ 0.48
HDAC9-226ENST00000496026 UQCRFS1P1P0C7P4 283 aa18.08■□□□□ 0.48
HDAC9-226ENST00000496026 JAG2Q9Y219 1238 aa18.08■□□□□ 0.48
HDAC9-226ENST00000496026 SEMA3EO15041 775 aa18.07■□□□□ 0.48
HDAC9-226ENST00000496026 DACT2Q5SW24 774 aa18.07■□□□□ 0.48
HDAC9-226ENST00000496026 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
HDAC9-226ENST00000496026 RSBN1LQ6PCB5 846 aaPredicted RBP18.07■□□□□ 0.48
HDAC9-226ENST00000496026 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms