RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
ECHDC3-204ENST00000495787 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
ECHDC3-204ENST00000495787 ARAP2Q8WZ64 1704 aa13.04□□□□□ -0.32
ECHDC3-204ENST00000495787 NPHP1O15259 732 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 REC8O95072 547 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 PDE8BO95263 885 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 RBM25P49756 843 aaKnown RBP13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 ANKRD18AQ8IVF6 992 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 IPO9Q96P70 1041 aaKnown RBP13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 HAUS7Q99871 368 aa13.03□□□□□ -0.32
ECHDC3-204ENST00000495787 A0A1B0GUL6 1792 aa13.02□□□□□ -0.32
ECHDC3-204ENST00000495787 TAF1P21675 1872 aa13.02□□□□□ -0.32
ECHDC3-204ENST00000495787 HIP1O00291 1037 aa13.02□□□□□ -0.33
ECHDC3-204ENST00000495787 SERPINB2P05120 415 aa13.02□□□□□ -0.33
ECHDC3-204ENST00000495787 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.33
ECHDC3-204ENST00000495787 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
ECHDC3-204ENST00000495787 XAGE2Q96GT9 111 aa13.02□□□□□ -0.33
ECHDC3-204ENST00000495787 FGFR2P21802 821 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 ST5P78524 1137 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 PUM3Q15397 648 aaKnown RBP13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 DPY19L2Q6NUT2 758 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 LPIN2Q92539 896 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
ECHDC3-204ENST00000495787 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 NRXN2Q9P2S2 1712 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 COL4A1P02462 1669 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
ECHDC3-204ENST00000495787 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
ECHDC3-204ENST00000495787 ADORA1P30542 326 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
ECHDC3-204ENST00000495787 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
ECHDC3-204ENST00000495787 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
ECHDC3-204ENST00000495787 POTECB2RU33 542 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 H0YIN7 160 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 NFKBIEO00221 500 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 SGSM2O43147 1006 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 SLC5A1P13866 664 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 CHRNDQ07001 517 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 C2CD5Q86YS7 1000 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 CCDC24Q8N4L8 307 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 FSD1Q9BTV5 496 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
ECHDC3-204ENST00000495787 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
ECHDC3-204ENST00000495787 UQCRFS1P1P0C7P4 283 aa12.98□□□□□ -0.33
ECHDC3-204ENST00000495787 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
ECHDC3-204ENST00000495787 RAD50Q92878 1312 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 TAF5LO75529 589 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 GRAPQ13588 217 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 GRAPLQ8TC17 118 aaPredicted RBP12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 MKRN1Q9UHC7 482 aaKnown RBP12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 MINPP1Q9UNW1 487 aa12.97□□□□□ -0.33
ECHDC3-204ENST00000495787 MYH7P12883 1935 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 ANKRD31Q8N7Z5 1873 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 NMIQ13287 307 aaPredicted RBP12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 ANO2Q9NQ90 1003 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 SNRKQ9NRH2 765 aa12.96□□□□□ -0.33
ECHDC3-204ENST00000495787 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 GOLIM4O00461 696 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 MCCP23508 829 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 BECN1Q14457 450 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 KIAA1211Q6ZU35 1233 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 KIF2CQ99661 725 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 IL25Q9H293 177 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 NDUFB9Q9Y6M9 179 aa12.95□□□□□ -0.34
ECHDC3-204ENST00000495787 FOXN1O15353 648 aa12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 HOXA10P31260 410 aaPredicted RBP12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 PHKA1P46020 1223 aa12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 FKBP4Q02790 459 aaKnown RBP eCLIP12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 BRIP1Q9BX63 1249 aa12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 LSG1Q9H089 658 aaKnown RBP12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
ECHDC3-204ENST00000495787 A0A0D9SFI3 127 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms