RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 MPRIPQ6WCQ1 1025 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 BRINP3Q76B58 766 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 G2E3Q7L622 706 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 MPNDQ8N594 471 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
EPHA4-213ENST00000495693 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
EPHA4-213ENST00000495693 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 KSR2Q6VAB6 950 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 ERC1Q8IUD2 1116 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 EHBP1Q8NDI1 1231 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 SNX21Q969T3 373 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 HMX1Q9NP08 348 aaPredicted RBP10.56□□□□□ -0.72
EPHA4-213ENST00000495693 PRDM11Q9NQV5 511 aa10.56□□□□□ -0.72
EPHA4-213ENST00000495693 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
EPHA4-213ENST00000495693 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 RGPD5Q99666 1765 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 F6X3S4 739 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 HSPA2P54652 639 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 NR6A1Q15406 480 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 SH3RF1Q7Z6J0 888 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
EPHA4-213ENST00000495693 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 FMNL2Q96PY5 1086 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 CHPF2Q9P2E5 772 aa10.55□□□□□ -0.72
EPHA4-213ENST00000495693 SNRPA1P09661 255 aaKnown RBP10.54□□□□□ -0.72
EPHA4-213ENST00000495693 MCCP23508 829 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 PDXDC2PQ6P474 469 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
EPHA4-213ENST00000495693 Q6ZNB5 142 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 LINS1Q8NG48 757 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
EPHA4-213ENST00000495693 MEGF6O75095 1541 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-213ENST00000495693 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 ERVV-2B6SEH9 535 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 PTMSP20962 102 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 MTX1Q13505 466 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 BEND3Q5T5X7 828 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 TBC1D9Q6ZT07 1266 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-213ENST00000495693 GPSM3Q9Y4H4 160 aa10.53□□□□□ -0.72
EPHA4-213ENST00000495693 COL5A2P05997 1499 aaPredicted RBP10.53□□□□□ -0.72
EPHA4-213ENST00000495693 LAMB4A4D0S4 1761 aa10.52□□□□□ -0.72
EPHA4-213ENST00000495693 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
EPHA4-213ENST00000495693 AVPP01185 164 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 MX1P20591 662 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 CABP4P57796 275 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 RABEP1Q15276 862 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 PKDCCQ504Y2 493 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 TOM1L2Q6ZVM7 507 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 FOXJ1Q92949 421 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
EPHA4-213ENST00000495693 C1QTNF2Q9BXJ5 285 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 STAP2Q9UGK3 403 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 LRRFIP2Q9Y608 721 aaKnown RBP10.52□□□□□ -0.73
EPHA4-213ENST00000495693 ABCA3Q99758 1704 aa10.52□□□□□ -0.73
EPHA4-213ENST00000495693 ERC2O15083 957 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 IL2RBP14784 551 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 SMPD1P17405 629 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 PDE1AP54750 535 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 C4orf48Q5BLP8 95 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 ZCRB1Q8TBF4 217 aaKnown RBP10.51□□□□□ -0.73
EPHA4-213ENST00000495693 FAM174AQ8TBP5 190 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 PHAXQ9H814 394 aaKnown RBP10.51□□□□□ -0.73
EPHA4-213ENST00000495693 UTYO14607 1347 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 TTC41PQ6P2S7 1318 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 ADCY9O60503 1353 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 COL15A1P39059 1388 aa10.51□□□□□ -0.73
EPHA4-213ENST00000495693 FAM187AA6NFU0 413 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 APBB1O00213 710 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 SRGAP3O43295 1099 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
EPHA4-213ENST00000495693 EVA1CP58658 441 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 MTMR14Q8NCE2 650 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 CHMP5Q9NZZ3 219 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 MAP3K2Q9Y2U5 619 aa10.5□□□□□ -0.73
EPHA4-213ENST00000495693 ZNF335Q9H4Z2 1342 aaPredicted RBP10.5□□□□□ -0.73
EPHA4-213ENST00000495693 LCE2BO14633 110 aa10.49□□□□□ -0.73
EPHA4-213ENST00000495693 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
EPHA4-213ENST00000495693 MCM2P49736 904 aa10.49□□□□□ -0.73
EPHA4-213ENST00000495693 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
EPHA4-213ENST00000495693 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
EPHA4-213ENST00000495693 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
EPHA4-213ENST00000495693 CDK15Q96Q40 435 aa10.49□□□□□ -0.73
EPHA4-213ENST00000495693 TEX13AQ9BXU3 409 aaPredicted RBP10.49□□□□□ -0.73
EPHA4-213ENST00000495693 AHDC1Q5TGY3 1603 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms