RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 SASH1O94885 1247 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 DACT2Q5SW24 774 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 ZNF333Q96JL9 665 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 ANGEL1Q9UNK9 670 aaKnown RBP14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 XDHP47989 1333 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 SSC5DA1L4H1 1573 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 ECM29Q5VYK3 1845 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
HLA-DOA-206ENST00000495532 ZBTB48P10074 688 aaPredicted RBP14.79□□□□□ -0.04
HLA-DOA-206ENST00000495532 CRHR2Q13324 411 aa14.79□□□□□ -0.04
HLA-DOA-206ENST00000495532 KRT24Q2M2I5 525 aa14.79□□□□□ -0.04
HLA-DOA-206ENST00000495532 ANKRD13DQ6ZTN6 518 aa14.79□□□□□ -0.04
HLA-DOA-206ENST00000495532 EFCC1Q9HA90 598 aa14.79□□□□□ -0.04
HLA-DOA-206ENST00000495532 COL1A1P02452 1464 aaPredicted RBP14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 WTIPA6NIX2 430 aaPredicted RBP14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 MAP3K11Q16584 847 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 APOBEC3FQ8IUX4 373 aaKnown RBP14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 OGFOD1Q8N543 542 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 OTOFQ9HC10 1997 aa14.78□□□□□ -0.04
HLA-DOA-206ENST00000495532 MED23Q9ULK4 1368 aa14.77□□□□□ -0.04
HLA-DOA-206ENST00000495532 MYO3BQ8WXR4 1341 aa14.77□□□□□ -0.04
HLA-DOA-206ENST00000495532 MAPK8IP3Q9UPT6 1336 aa14.77□□□□□ -0.04
HLA-DOA-206ENST00000495532 ZBED3Q96IU2 234 aaPredicted RBP14.77□□□□□ -0.05
HLA-DOA-206ENST00000495532 COL6A3P12111 3177 aa14.77□□□□□ -0.05
HLA-DOA-206ENST00000495532 ATP2B4P23634 1241 aa14.76□□□□□ -0.05
HLA-DOA-206ENST00000495532 SP3Q02447 781 aa14.76□□□□□ -0.05
HLA-DOA-206ENST00000495532 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
HLA-DOA-206ENST00000495532 ZBTB38Q8NAP3 1195 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOA-206ENST00000495532 SLC10A4Q96EP9 437 aa14.76□□□□□ -0.05
HLA-DOA-206ENST00000495532 CCDC152Q4G0S7 254 aa14.75□□□□□ -0.05
HLA-DOA-206ENST00000495532 STRIP1Q5VSL9 837 aa14.75□□□□□ -0.05
HLA-DOA-206ENST00000495532 SLC17A8Q8NDX2 589 aa14.75□□□□□ -0.05
HLA-DOA-206ENST00000495532 RBM27Q9P2N5 1060 aaKnown RBP14.75□□□□□ -0.05
HLA-DOA-206ENST00000495532 ZSWIM8A7E2V4 1837 aa14.75□□□□□ -0.05
HLA-DOA-206ENST00000495532 MYH3P11055 1940 aa14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 GJA5P36382 358 aa14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 MMP14P50281 582 aa14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 PTPN18Q99952 460 aa14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 PTCH2Q9Y6C5 1203 aa14.74□□□□□ -0.05
HLA-DOA-206ENST00000495532 TESPA1A2RU30 521 aaPredicted RBP14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 RIPK4P57078 832 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 SLC9C1Q4G0N8 1177 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 HDGFL1Q5TGJ6 251 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 ANKRD18AQ8IVF6 992 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 DEFB129Q9H1M3 183 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 LAMA3Q16787 3333 aa14.73□□□□□ -0.05
HLA-DOA-206ENST00000495532 A0A0C4DFX4 3053 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 UNCXA6NJT0 531 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 SLC4A8Q2Y0W8 1093 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 NBPF11Q86T75 865 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 KIAA0825Q8IV33 1275 aa14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 DBF4Q9UBU7 674 aaPredicted RBP14.72□□□□□ -0.05
HLA-DOA-206ENST00000495532 CHL1O00533 1208 aa14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 PPP1R12BO60237 982 aaPredicted RBP14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 PDE8AO60658 829 aa14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 HSP90B1P14625 803 aaKnown RBP14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 COA1Q9GZY4 146 aa14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 PRO3102Q9H379 93 aa14.71□□□□□ -0.05
HLA-DOA-206ENST00000495532 MYCP01106 439 aaPredicted RBP14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 PCCAP05165 728 aaPredicted RBP14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 HOXB7P09629 217 aa14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 JARID2Q92833 1246 aaPredicted RBP14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 HYPKQ9NX55 129 aa14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 MINPP1Q9UNW1 487 aa14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 PPP2R3BQ9Y5P8 575 aa14.7□□□□□ -0.06
HLA-DOA-206ENST00000495532 CCT4P50991 539 aaKnown RBP14.69□□□□□ -0.06
HLA-DOA-206ENST00000495532 TTLL5Q6EMB2 1281 aa14.69□□□□□ -0.06
HLA-DOA-206ENST00000495532 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
HLA-DOA-206ENST00000495532 ZNF804BA4D1E1 1349 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 USP2O75604 605 aaPredicted RBP14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 KLRK1P26718 216 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 TMPOP42166 694 aaKnown RBP14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 LMOD3Q0VAK6 560 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 CCDC191Q8NCU4 936 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 SH3TC2Q8TF17 1288 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 MS4A4AQ96JQ5 239 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 CDC5LQ99459 802 aaKnown RBP14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 BSDC1Q9NW68 430 aaPredicted RBP14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 PCDHAC2Q9Y5I4 1007 aa14.68□□□□□ -0.06
HLA-DOA-206ENST00000495532 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 ARHGEF6Q15052 776 aa14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 NBPF12Q5TAG4 269 aaPredicted RBP14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 RIC3Q7Z5B4 369 aa14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 ANKRD13AQ8IZ07 590 aa14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 MTMR14Q8NCE2 650 aa14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 MYD88Q99836 296 aa14.67□□□□□ -0.06
HLA-DOA-206ENST00000495532 CTSWP56202 376 aa14.66□□□□□ -0.06
HLA-DOA-206ENST00000495532 GTF2IP78347 998 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms