RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PLA2G12BQ9BX93 195 aa28.25■■■□□ 2.11
HDDC3-203ENST00000494993 MYOZ2Q9NPC6 264 aa28.25■■■□□ 2.11
HDDC3-203ENST00000494993 FAM155AB1AL88 458 aaPredicted RBP28.24■■■□□ 2.11
HDDC3-203ENST00000494993 IGHMBP2P38935 993 aaKnown RBP28.24■■■□□ 2.11
HDDC3-203ENST00000494993 FKBP5Q13451 457 aaPredicted RBP28.24■■■□□ 2.11
HDDC3-203ENST00000494993 ANGEL2Q5VTE6 544 aaKnown RBP28.24■■■□□ 2.11
HDDC3-203ENST00000494993 CDCA5Q96FF9 252 aa28.24■■■□□ 2.11
HDDC3-203ENST00000494993 A0A1B0GUL6 1792 aa28.24■■■□□ 2.11
HDDC3-203ENST00000494993 DNAAF4Q8WXU2 420 aa28.23■■■□□ 2.11
HDDC3-203ENST00000494993 MYH16Q9H6N6 1097 aa28.23■■■□□ 2.11
HDDC3-203ENST00000494993 PAPPA2Q9BXP8 1791 aa28.22■■■□□ 2.11
HDDC3-203ENST00000494993 CASP7P55210 303 aa28.22■■■□□ 2.11
HDDC3-203ENST00000494993 CCDC102AQ96A19 550 aa28.22■■■□□ 2.11
HDDC3-203ENST00000494993 PITPNM2Q9BZ72 1349 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 VAMP4O75379 141 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 ITGA6P23229 1130 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 ZNF157P51786 506 aaPredicted RBP28.21■■■□□ 2.11
HDDC3-203ENST00000494993 WDR63Q8IWG1 891 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 LINS1Q8NG48 757 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 LEMD3Q9Y2U8 911 aa28.21■■■□□ 2.11
HDDC3-203ENST00000494993 FAM161AQ3B820 660 aa28.2■■■□□ 2.1
HDDC3-203ENST00000494993 COA1Q9GZY4 146 aa28.2■■■□□ 2.1
HDDC3-203ENST00000494993 SALL2Q9Y467 1007 aaPredicted RBP28.2■■■□□ 2.1
HDDC3-203ENST00000494993 ANP32CO43423 234 aa28.19■■■□□ 2.1
HDDC3-203ENST00000494993 CSF1RP07333 972 aa28.19■■■□□ 2.1
HDDC3-203ENST00000494993 DACT2Q5SW24 774 aa28.19■■■□□ 2.1
HDDC3-203ENST00000494993 TXNRD3Q86VQ6 643 aa28.19■■■□□ 2.1
HDDC3-203ENST00000494993 SLC10A3P09131 477 aa28.18■■■□□ 2.1
HDDC3-203ENST00000494993 ANKRD2Q9GZV1 360 aa28.18■■■□□ 2.1
HDDC3-203ENST00000494993 ZNF804BA4D1E1 1349 aa28.18■■■□□ 2.1
HDDC3-203ENST00000494993 MYO3BQ8WXR4 1341 aa28.18■■■□□ 2.1
HDDC3-203ENST00000494993 KIF23Q02241 960 aaPredicted RBP28.17■■■□□ 2.1
HDDC3-203ENST00000494993 EXOSC9Q06265 439 aaKnown RBP28.17■■■□□ 2.1
HDDC3-203ENST00000494993 STRIP1Q5VSL9 837 aa28.17■■■□□ 2.1
HDDC3-203ENST00000494993 FBXW7Q969H0 707 aa28.17■■■□□ 2.1
HDDC3-203ENST00000494993 MPHOSPH8Q99549 860 aa28.17■■■□□ 2.1
HDDC3-203ENST00000494993 MXD3Q9BW11 206 aa28.17■■■□□ 2.1
HDDC3-203ENST00000494993 FKBP1BP68106 108 aa28.15■■■□□ 2.1
HDDC3-203ENST00000494993 OGFOD1Q8N543 542 aa28.15■■■□□ 2.1
HDDC3-203ENST00000494993 SAGE1Q9NXZ1 904 aa28.15■■■□□ 2.1
HDDC3-203ENST00000494993 CCDC85CA6NKD9 419 aa28.14■■■□□ 2.1
HDDC3-203ENST00000494993 KLRK1P26718 216 aa28.14■■■□□ 2.1
HDDC3-203ENST00000494993 NBPF9Q3BBW0 867 aa28.14■■■□□ 2.1
HDDC3-203ENST00000494993 MCOLN1Q9GZU1 580 aa28.14■■■□□ 2.1
HDDC3-203ENST00000494993 SCAF8Q9UPN6 1271 aaKnown RBP28.14■■■□□ 2.1
HDDC3-203ENST00000494993 ANKRD18BA2A2Z9 1011 aa28.12■■■□□ 2.09
HDDC3-203ENST00000494993 ZEB1P37275 1124 aaPredicted RBP28.12■■■□□ 2.09
HDDC3-203ENST00000494993 CHRNDQ07001 517 aa28.12■■■□□ 2.09
HDDC3-203ENST00000494993 RASAL3Q86YV0 1011 aa28.12■■■□□ 2.09
HDDC3-203ENST00000494993 ECM29Q5VYK3 1845 aa28.12■■■□□ 2.09
HDDC3-203ENST00000494993 F6X3S4 739 aa28.11■■■□□ 2.09
HDDC3-203ENST00000494993 WNT10BO00744 389 aa28.11■■■□□ 2.09
HDDC3-203ENST00000494993 KCNJ4P48050 445 aa28.11■■■□□ 2.09
HDDC3-203ENST00000494993 MMP14P50281 582 aa28.11■■■□□ 2.09
HDDC3-203ENST00000494993 TTLL5Q6EMB2 1281 aa28.11■■■□□ 2.09
HDDC3-203ENST00000494993 SPINK5Q9NQ38 1064 aaPredicted RBP28.11■■■□□ 2.09
HDDC3-203ENST00000494993 ZNF316A6NFI3 1004 aaPredicted RBP28.1■■■□□ 2.09
HDDC3-203ENST00000494993 DGKZQ13574 1117 aa28.1■■■□□ 2.09
HDDC3-203ENST00000494993 BEND3Q5T5X7 828 aa28.1■■■□□ 2.09
HDDC3-203ENST00000494993 CSRNP1Q96S65 589 aa28.1■■■□□ 2.09
HDDC3-203ENST00000494993 RNF186Q9NXI6 227 aa28.1■■■□□ 2.09
HDDC3-203ENST00000494993 FOXO4P98177 505 aa28.09■■■□□ 2.09
HDDC3-203ENST00000494993 TRPA1O75762 1119 aa28.08■■■□□ 2.09
HDDC3-203ENST00000494993 GTF2IP78347 998 aa28.08■■■□□ 2.09
HDDC3-203ENST00000494993 IFIT5Q13325 482 aaKnown RBP28.08■■■□□ 2.09
HDDC3-203ENST00000494993 PRAMEF18Q5VWM3 479 aa28.08■■■□□ 2.09
HDDC3-203ENST00000494993 MOB2Q70IA6 237 aa28.08■■■□□ 2.09
HDDC3-203ENST00000494993 SASH1O94885 1247 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 KIAA0825Q8IV33 1275 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 REM2Q8IYK8 340 aaPredicted RBP28.07■■■□□ 2.08
HDDC3-203ENST00000494993 CD209Q9NNX6 404 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 HDAC9Q9UKV0 1011 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 CHMP3Q9Y3E7 222 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 IRS2Q9Y4H2 1338 aa28.07■■■□□ 2.08
HDDC3-203ENST00000494993 SNAP23O00161 211 aa28.05■■■□□ 2.08
HDDC3-203ENST00000494993 TAF5LO75529 589 aa28.05■■■□□ 2.08
HDDC3-203ENST00000494993 C15orf52Q6ZUT6 534 aaKnown RBP28.05■■■□□ 2.08
HDDC3-203ENST00000494993 HELBQ8NG08 1087 aaPredicted RBP28.05■■■□□ 2.08
HDDC3-203ENST00000494993 UBE2Q2LH0YL09 131 aa28.04■■■□□ 2.08
HDDC3-203ENST00000494993 LMBR1LQ6UX01 489 aa28.04■■■□□ 2.08
HDDC3-203ENST00000494993 GRM8O00222 908 aa28.03■■■□□ 2.08
HDDC3-203ENST00000494993 NF2P35240 595 aa28.03■■■□□ 2.08
HDDC3-203ENST00000494993 APOBEC3FQ8IUX4 373 aaKnown RBP28.03■■■□□ 2.08
HDDC3-203ENST00000494993 ZBED3Q96IU2 234 aaPredicted RBP28.03■■■□□ 2.08
HDDC3-203ENST00000494993 RGS19P49795 217 aa28.02■■■□□ 2.08
HDDC3-203ENST00000494993 TTLL12Q14166 644 aaPredicted RBP28.02■■■□□ 2.08
HDDC3-203ENST00000494993 EPHA10Q5JZY3 1008 aa28.02■■■□□ 2.08
HDDC3-203ENST00000494993 FAM9BQ8IZU0 186 aa28.02■■■□□ 2.08
HDDC3-203ENST00000494993 CCDC57Q2TAC2 916 aa28■■■□□ 2.07
HDDC3-203ENST00000494993 ZNF804AQ7Z570 1209 aa28■■■□□ 2.07
HDDC3-203ENST00000494993 CERS5Q8N5B7 392 aa28■■■□□ 2.07
HDDC3-203ENST00000494993 COL1A1P02452 1464 aaPredicted RBP28■■■□□ 2.07
HDDC3-203ENST00000494993 IL1R1P14778 569 aa27.99■■■□□ 2.07
HDDC3-203ENST00000494993 TAF7LQ5H9L4 462 aa27.99■■■□□ 2.07
HDDC3-203ENST00000494993 ZNF594Q96JF6 807 aaPredicted RBP27.99■■■□□ 2.07
HDDC3-203ENST00000494993 C9orf78Q9NZ63 289 aaPredicted RBP27.99■■■□□ 2.07
HDDC3-203ENST00000494993 ALDH1L1O75891 902 aa27.98■■■□□ 2.07
HDDC3-203ENST00000494993 MLLT1Q03111 559 aaPredicted RBP27.98■■■□□ 2.07
HDDC3-203ENST00000494993 LDHAL6AQ6ZMR3 332 aa27.98■■■□□ 2.07
HDDC3-203ENST00000494993 DLGAP5Q15398 846 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms