RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 ZBTB7BO15156 539 aaPredicted RBP6.96□□□□□ -1.29
PHC3-214ENST00000494943 BPIFA3Q9BQP9 254 aa6.96□□□□□ -1.29
PHC3-214ENST00000494943 TSGA10Q9BZW7 698 aa6.96□□□□□ -1.29
PHC3-214ENST00000494943 MAGEC2Q9UBF1 373 aaPredicted RBP6.96□□□□□ -1.29
PHC3-214ENST00000494943 ZFYVE9O95405 1425 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 USO1O60763 962 aaKnown RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 CDKL5O76039 1030 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 ATP11AP98196 1134 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 CROCCP2Q86T23 111 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 TM6SF1Q9BZW5 370 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 A1CFQ9NQ94 594 aaKnown RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 CFAP65Q6ZU64 1925 aaKnown RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 GCOM1H8Y6P7 765 aaPredicted RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 TRIM66O15016 1216 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 CD2BP2O95400 341 aaKnown RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 MYZAPP0CAP1 466 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 NAP1L1P55209 391 aaKnown RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 NLRP12P59046 1061 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 SEPT14Q6ZU15 432 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 EGFL6Q8IUX8 553 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 SPINK5Q9NQ38 1064 aaPredicted RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 CWC25Q9NXE8 425 aaPredicted RBP6.96□□□□□ -1.3
PHC3-214ENST00000494943 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
PHC3-214ENST00000494943 RNF40O75150 1001 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 CCDC57Q2TAC2 916 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 CNGA4Q8IV77 575 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 THUMPD2Q9BTF0 503 aaKnown RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 TADA3O75528 432 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 SEC31AO94979 1220 aaKnown RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 SLC8A3P57103 927 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 GNGT1P63211 74 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 KRT83P78385 493 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 MYL5Q02045 173 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 CLASRPQ8N2M8 674 aaKnown RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 KIF2CQ99661 725 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 PARD6BQ9BYG5 372 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 TRIM4Q9C037 500 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.95□□□□□ -1.3
PHC3-214ENST00000494943 FAM169AQ9Y6X4 670 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 ZNF644Q9H582 1327 aaPredicted RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 SPAG1Q07617 926 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 JPH4Q96JJ6 628 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 OSBPL9Q96SU4 736 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 CDC23Q9UJX2 597 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 PPP2R2CQ9Y2T4 447 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 AK2P54819 239 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 LLPHQ9BRT6 129 aaKnown RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 ZBTB12Q9Y330 459 aaPredicted RBP6.95□□□□□ -1.3
PHC3-214ENST00000494943 RICTORQ6R327 1708 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 ARAP3Q8WWN8 1544 aa6.95□□□□□ -1.3
PHC3-214ENST00000494943 LRRD1A4D1F6 860 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 STX10O60499 249 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 CHMLP26374 656 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 CCT5P48643 541 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 SEPT2Q15019 361 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 SPECC1Q5M775 1068 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 RBM26Q5T8P6 1007 aaKnown RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 KLHL10Q6JEL2 608 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 AMOTL1Q8IY63 956 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 BCAS4Q8TDM0 211 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 LEO1Q8WVC0 666 aaPredicted RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 BICC1Q9H694 974 aaKnown RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 A2MP01023 1474 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 RPAP1Q9BWH6 1393 aaPredicted RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 PTCH1Q13635 1447 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 PPIP5K1Q6PFW1 1433 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 PKP1Q13835 747 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 TEX9Q8N6V9 391 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 ATRIPQ8WXE1 791 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 MOV10L1Q9BXT6 1211 aaKnown RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 VCX3BQ9H321 246 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 VCX3AQ9NNX9 186 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 ABCC4O15439 1325 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 AKR1B15C9JRZ8 316 aaPredicted RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 CREB3O43889 395 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 FANCCQ00597 558 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 WASHC4Q2M389 1173 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 ALS2CLQ60I27 953 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 CCDC170Q8IYT3 715 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 PCMTD1Q96MG8 357 aaPredicted RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 CHCHD3Q9NX63 227 aaKnown RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 ANAPC4Q9UJX5 808 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 ADGRL3Q9HAR2 1447 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 IKBKBO14920 756 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 GIGYF1O75420 1035 aaPredicted RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 HNRNPH1P31943 449 aaKnown RBP6.94□□□□□ -1.3
PHC3-214ENST00000494943 SPA17Q15506 151 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 TBC1D31Q96DN5 1066 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 ANKRD27Q96NW4 1050 aa6.94□□□□□ -1.3
PHC3-214ENST00000494943 TRIM7Q9C029 511 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms