RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 BCAR3O75815 825 aa22.09■■□□□ 1.13
HDAC4-211ENST00000494800 ZNF804AQ7Z570 1209 aa22.09■■□□□ 1.13
HDAC4-211ENST00000494800 MYO3BQ8WXR4 1341 aa22.08■■□□□ 1.13
HDAC4-211ENST00000494800 STRIP1Q5VSL9 837 aa22.08■■□□□ 1.13
HDAC4-211ENST00000494800 INTS3Q68E01 1043 aaKnown RBP22.08■■□□□ 1.13
HDAC4-211ENST00000494800 C15orf52Q6ZUT6 534 aaKnown RBP22.08■■□□□ 1.13
HDAC4-211ENST00000494800 DNAJC5GQ8N7S2 189 aa22.08■■□□□ 1.13
HDAC4-211ENST00000494800 KLRG1Q96E93 195 aa22.08■■□□□ 1.13
HDAC4-211ENST00000494800 ZNF609O15014 1411 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 TMEM88BA6NKF7 163 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 GNAI3P08754 354 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 TRIM27P14373 513 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 ZKSCAN2Q63HK3 967 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 TXNRD3Q86VQ6 643 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 TRPM4Q8TD43 1214 aa22.07■■□□□ 1.12
HDAC4-211ENST00000494800 USP17L8P0C7I0 530 aa22.06■■□□□ 1.12
HDAC4-211ENST00000494800 KLRK1P26718 216 aa22.06■■□□□ 1.12
HDAC4-211ENST00000494800 UBE4AQ14139 1066 aa22.06■■□□□ 1.12
HDAC4-211ENST00000494800 TBC1D10BQ4KMP7 808 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-211ENST00000494800 METTL24Q5JXM2 366 aa22.06■■□□□ 1.12
HDAC4-211ENST00000494800 SAMD7Q7Z3H4 446 aa22.06■■□□□ 1.12
HDAC4-211ENST00000494800 SHTN1A0MZ66 631 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 KIF4BQ2VIQ3 1234 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
HDAC4-211ENST00000494800 TTLL5Q6EMB2 1281 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 OGFOD1Q8N543 542 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 PUS3Q9BZE2 481 aaKnown RBP22.05■■□□□ 1.12
HDAC4-211ENST00000494800 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 PGAP2Q9UHJ9 254 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 RIPOR2Q9Y4F9 1068 aa22.05■■□□□ 1.12
HDAC4-211ENST00000494800 MMP14P50281 582 aa22.04■■□□□ 1.12
HDAC4-211ENST00000494800 HIRAP54198 1017 aaPredicted RBP22.04■■□□□ 1.12
HDAC4-211ENST00000494800 DACT2Q5SW24 774 aa22.04■■□□□ 1.12
HDAC4-211ENST00000494800 CDC37L1Q7L3B6 337 aa22.04■■□□□ 1.12
HDAC4-211ENST00000494800 SNAP23O00161 211 aa22.03■■□□□ 1.12
HDAC4-211ENST00000494800 ZNF280AP59817 542 aaPredicted RBP22.03■■□□□ 1.12
HDAC4-211ENST00000494800 FTSJ3Q8IY81 847 aaKnown RBP22.03■■□□□ 1.12
HDAC4-211ENST00000494800 CLUAP1Q96AJ1 413 aa22.03■■□□□ 1.12
HDAC4-211ENST00000494800 DCPSQ96C86 337 aaKnown RBP22.03■■□□□ 1.12
HDAC4-211ENST00000494800 MEIS3Q99687 375 aa22.03■■□□□ 1.12
HDAC4-211ENST00000494800 LRRFIP2Q9Y608 721 aaKnown RBP22.03■■□□□ 1.12
HDAC4-211ENST00000494800 SCN9AQ15858 1988 aa22.03■■□□□ 1.12
HDAC4-211ENST00000494800 GTF2IP78347 998 aa22.02■■□□□ 1.12
HDAC4-211ENST00000494800 LRRC24Q50LG9 513 aa22.02■■□□□ 1.12
HDAC4-211ENST00000494800 GMLQ99445 158 aa22.02■■□□□ 1.12
HDAC4-211ENST00000494800 IL1R1P14778 569 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 VPS37DQ86XT2 251 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 KLHDC4Q8TBB5 520 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 MYOZ2Q9NPC6 264 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 FBXO3Q9UK99 471 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 HDAC9Q9UKV0 1011 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 IRS2Q9Y4H2 1338 aa22.01■■□□□ 1.11
HDAC4-211ENST00000494800 EYA2O00167 538 aa22■■□□□ 1.11
HDAC4-211ENST00000494800 PDE8BO95263 885 aa22■■□□□ 1.11
HDAC4-211ENST00000494800 CAVIN4Q5BKX8 364 aa22■■□□□ 1.11
HDAC4-211ENST00000494800 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
HDAC4-211ENST00000494800 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
HDAC4-211ENST00000494800 PSME4Q14997 1843 aa22■■□□□ 1.11
HDAC4-211ENST00000494800 A0A1B0GUL6 1792 aa21.99■■□□□ 1.11
HDAC4-211ENST00000494800 TRAF5O00463 557 aa21.99■■□□□ 1.11
HDAC4-211ENST00000494800 EGFRP00533 1210 aa21.99■■□□□ 1.11
HDAC4-211ENST00000494800 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
HDAC4-211ENST00000494800 PTPN12Q05209 780 aaKnown RBP21.99■■□□□ 1.11
HDAC4-211ENST00000494800 GNAI2P04899 355 aa21.98■■□□□ 1.11
HDAC4-211ENST00000494800 RFX5P48382 616 aaPredicted RBP21.98■■□□□ 1.11
HDAC4-211ENST00000494800 PUM3Q15397 648 aaKnown RBP21.98■■□□□ 1.11
HDAC4-211ENST00000494800 KRT26Q7Z3Y9 468 aa21.98■■□□□ 1.11
HDAC4-211ENST00000494800 SULF1Q8IWU6 871 aa21.98■■□□□ 1.11
HDAC4-211ENST00000494800 MXD3Q9BW11 206 aa21.98■■□□□ 1.11
HDAC4-211ENST00000494800 MKRN1Q9UHC7 482 aaKnown RBP21.98■■□□□ 1.11
HDAC4-211ENST00000494800 CIAO1O76071 339 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 SASH1O94885 1247 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 IFIT1P09914 478 aaKnown RBP21.97■■□□□ 1.11
HDAC4-211ENST00000494800 SCARF1Q14162 830 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 USP48Q86UV5 1035 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 KIAA0825Q8IV33 1275 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 DZIP1LQ8IYY4 767 aaKnown RBP21.97■■□□□ 1.11
HDAC4-211ENST00000494800 TMEM57Q8N5G2 664 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 JMYQ8N9B5 988 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 GGA3Q9NZ52 723 aa21.97■■□□□ 1.11
HDAC4-211ENST00000494800 CELF2O95319 508 aaKnown RBP21.96■■□□□ 1.11
HDAC4-211ENST00000494800 GYG1P46976 350 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 FKBP1AP62942 108 aaKnown RBP21.96■■□□□ 1.11
HDAC4-211ENST00000494800 VGLL2Q8N8G2 317 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 SIL1Q9H173 461 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 ZNF408Q9H9D4 720 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 TNNQ9UQP3 1299 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 CNTNAP1P78357 1384 aa21.96■■□□□ 1.11
HDAC4-211ENST00000494800 SRGAP3O43295 1099 aa21.95■■□□□ 1.1
HDAC4-211ENST00000494800 FRAT2O75474 233 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-211ENST00000494800 MS4A1P11836 297 aa21.95■■□□□ 1.1
HDAC4-211ENST00000494800 SLC5A1P13866 664 aa21.95■■□□□ 1.1
HDAC4-211ENST00000494800 IL15P40933 162 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-211ENST00000494800 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
HDAC4-211ENST00000494800 FAM84BQ96KN1 310 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-211ENST00000494800 CEP126Q9P2H0 1117 aa21.95■■□□□ 1.1
HDAC4-211ENST00000494800 FMR1Q06787 632 aaKnown RBP eCLIP21.94■■□□□ 1.1
HDAC4-211ENST00000494800 ANGEL2Q5VTE6 544 aaKnown RBP21.94■■□□□ 1.1
HDAC4-211ENST00000494800 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
HDAC4-211ENST00000494800 TDRD7Q8NHU6 1098 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms