RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TXLNAP40222 546 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 FANCCQ00597 558 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 PHACTR2O75167 634 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 GLRX3O76003 335 aaKnown RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 CPP00450 1065 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 IRX2Q9BZI1 471 aaPredicted RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 NAT10Q9H0A0 1025 aaKnown RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
LINC00488-201ENST00000494582 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
LINC00488-201ENST00000494582 MYH15Q9Y2K3 1946 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 ARAP3Q8WWN8 1544 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 NDUFA8P51970 172 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 MCTP2Q6DN12 878 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 TOGARAM2Q6ZUX3 1019 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
LINC00488-201ENST00000494582 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 SIL1Q9H173 461 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 RIMS1Q86UR5 1692 aaKnown RBP11.73□□□□□ -0.53
LINC00488-201ENST00000494582 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
LINC00488-201ENST00000494582 PSMA5P28066 241 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 ME1P48163 572 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
LINC00488-201ENST00000494582 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 ZNF589Q86UQ0 364 aaPredicted RBP11.73□□□□□ -0.53
LINC00488-201ENST00000494582 GOLGA1Q92805 767 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 KIAA1468Q9P260 1216 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 PCDHA7Q9UN72 937 aa11.73□□□□□ -0.53
LINC00488-201ENST00000494582 A0A0U1RQJ8 604 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 CLGNO14967 610 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 DNAJC21Q5F1R6 531 aaKnown RBP11.72□□□□□ -0.53
LINC00488-201ENST00000494582 CNNM3Q8NE01 707 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 ATRIPQ8WXE1 791 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 SDF4Q9BRK5 362 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
LINC00488-201ENST00000494582 ABCB6Q9NP58 842 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 ABCC6O95255 1503 aa11.72□□□□□ -0.53
LINC00488-201ENST00000494582 GUCY1B3Q02153 619 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 SCRN1Q12765 414 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 BRD3Q15059 726 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 SKIDA1Q1XH10 827 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 MTHFSDQ2M296 383 aaKnown RBP11.71□□□□□ -0.53
LINC00488-201ENST00000494582 CLIC6Q96NY7 704 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
LINC00488-201ENST00000494582 INTS13Q9NVM9 706 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 L1RE1Q9UN81 338 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 CCP110O43303 1012 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 CTDNEP1O95476 244 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 COG3Q96JB2 828 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
LINC00488-201ENST00000494582 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
LINC00488-201ENST00000494582 NRKQ7Z2Y5 1582 aa11.71□□□□□ -0.54
LINC00488-201ENST00000494582 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.54
LINC00488-201ENST00000494582 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.54
LINC00488-201ENST00000494582 KARSQ15046 597 aaKnown RBP11.7□□□□□ -0.54
LINC00488-201ENST00000494582 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
LINC00488-201ENST00000494582 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
LINC00488-201ENST00000494582 COL15A1P39059 1388 aa11.7□□□□□ -0.54
LINC00488-201ENST00000494582 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
LINC00488-201ENST00000494582 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
LINC00488-201ENST00000494582 MKRN1Q9UHC7 482 aaKnown RBP11.7□□□□□ -0.54
LINC00488-201ENST00000494582 NRDCO43847 1150 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 USP5P45974 858 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 Q6ZUG5 572 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 HDXQ7Z353 690 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 CCDC91Q7Z6B0 441 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 HNRNPLLQ8WVV9 542 aaKnown RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 MRPL44Q9H9J2 332 aaKnown RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 DONSONQ9NYP3 566 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 RAB21Q9UL25 225 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 CUTAO60888 179 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 CHGBP05060 677 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 UBASH3AP57075 661 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 NLRP12P59046 1061 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 VSNL1P62760 191 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
LINC00488-201ENST00000494582 NSUN7Q8NE18 718 aaKnown RBP11.69□□□□□ -0.54
LINC00488-201ENST00000494582 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms