RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 CLK2P49760 499 aaKnown RBP6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 EXOSC9Q06265 439 aaKnown RBP6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 TRAPPC3LQ5T215 181 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 HDGFL1Q5TGJ6 251 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 G2E3Q7L622 706 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 FAM160A2Q8N612 972 aaPredicted RBP6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 PROCA1Q8NCQ7 364 aaPredicted RBP6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 USB1Q9BQ65 265 aaKnown RBP6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 ZBTB3Q9H5J0 574 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 NARFQ9UHQ1 456 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 ATP10DQ9P241 1426 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 ADCY9O60503 1353 aa6.55□□□□□ -1.36
CTNNA3-204ENST00000494580 IL16Q14005 1332 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 STARD3NLO95772 234 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 RFC4P35249 363 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 GNAI1P63096 354 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 MTMR2Q13614 643 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 PPP1R18Q6NYC8 613 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 BICDL1Q6ZP65 573 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 DZIP3Q86Y13 1208 aaKnown RBP6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 XAGE3Q8WTP9 111 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 ARXQ96QS3 562 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 IRX2Q9BZI1 471 aaPredicted RBP6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 PHAXQ9H814 394 aaKnown RBP6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 BABAM1Q9NWV8 329 aa6.54□□□□□ -1.36
CTNNA3-204ENST00000494580 S1PR4O95977 384 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 YBX3P16989 372 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 GPTP24298 496 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 TM4SF1P30408 202 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 GGCXP38435 758 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 SLFN5Q08AF3 891 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 TUSC1Q2TAM9 212 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 SYT17Q9BSW7 474 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 BCL2L13Q9BXK5 485 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 TNNQ9UQP3 1299 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 TAF1P21675 1872 aa6.53□□□□□ -1.36
CTNNA3-204ENST00000494580 MAP3K15Q6ZN16 1313 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 SPDYE5A6NIY4 337 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 FAM177BA6PVY3 158 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 PPEF1O14829 653 aaPredicted RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 VAMP4O75379 141 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 CHRNA5P30532 468 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 AIMP1Q12904 312 aaKnown RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 TWISTNBQ3B726 338 aaPredicted RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 PRPF38BQ5VTL8 546 aaKnown RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 PRR5LQ6MZQ0 368 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 RETREG3Q86VR2 466 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 WDR63Q8IWG1 891 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 TRMT2AQ8IZ69 625 aaKnown RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 SYNE4Q8N205 404 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 SLC16A10Q8TF71 515 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 PCMTD1Q96MG8 357 aaPredicted RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 GOPCQ9HD26 462 aa6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 DDX21Q9NR30 783 aaKnown RBP eCLIP6.52□□□□□ -1.373e-8■■■■■ 41.5
CTNNA3-204ENST00000494580 PPP1R1BQ9UD71 204 aaPredicted RBP6.52□□□□□ -1.37
CTNNA3-204ENST00000494580 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 SLX4Q8IY92 1834 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 LILRB3O75022 631 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 NTSR2O95665 410 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 HOXB7P09629 217 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 QPCTQ16769 361 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 MSS51Q4VC12 460 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 COPS6Q7L5N1 327 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 FLAD1Q8NFF5 587 aa6.51□□□□□ -1.37
CTNNA3-204ENST00000494580 SNED1Q8TER0 1413 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 ARFGEF1Q9Y6D6 1849 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 RNF223E7ERA6 249 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 F6X3S4 739 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 ATP5J2-PTCD1G3V325 749 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 SERPINB2P05120 415 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 DPEP1P16444 411 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 KCNA3P22001 575 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 POLD1P28340 1107 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 RTL5Q5HYW3 569 aaPredicted RBP6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 OLFM4Q6UX06 510 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 PRR7Q8TB68 274 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 SSH1Q8WYL5 1049 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 JARID2Q92833 1246 aaPredicted RBP6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 TEX13AQ9BXU3 409 aaPredicted RBP6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 PRDM9Q9NQV7 894 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 NIP7Q9Y221 180 aaKnown RBP eCLIP6.5□□□□□ -1.372e-8■■■■■ 48.3
CTNNA3-204ENST00000494580 SPEF2Q9C093 1822 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 LRRC37AA6NMS7 1700 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 ZBED9Q6R2W3 1325 aa6.5□□□□□ -1.37
CTNNA3-204ENST00000494580 COL4A5P29400 1685 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 DUOX1Q9NRD9 1551 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 A0A087WZG4 1122 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 A0A0G2JLW4 131 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 E9PSI1 815 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 RGS20O76081 388 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 IGKV5-2P06315 115 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 PRELPP51888 382 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 CALD1Q05682 793 aaKnown RBP6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 FLIIQ13045 1269 aa6.49□□□□□ -1.37
CTNNA3-204ENST00000494580 ERFEQ4G0M1 354 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms