RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PHKA1P46020 1223 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 CCDC102BQ68D86 513 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 HMG20BQ9P0W2 317 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 SNAP23O00161 211 aa19.81■□□□□ 0.76
ATG4B-225ENST00000494465 IGHMBP2P38935 993 aaKnown RBP19.81■□□□□ 0.76
ATG4B-225ENST00000494465 PKP1Q13835 747 aa19.81■□□□□ 0.76
ATG4B-225ENST00000494465 VPS53Q5VIR6 699 aa19.81■□□□□ 0.76
ATG4B-225ENST00000494465 SETDB2Q96T68 719 aa19.81■□□□□ 0.76
ATG4B-225ENST00000494465 CYP46A1Q9Y6A2 500 aa19.81■□□□□ 0.76
ATG4B-225ENST00000494465 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 KRT27Q7Z3Y8 459 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 OSBP2Q969R2 916 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-225ENST00000494465 M0R2C6 588 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 PDRG1Q9NUG6 133 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 LIMCH1Q9UPQ0 1083 aa19.8■□□□□ 0.76
ATG4B-225ENST00000494465 NUCB2P80303 420 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 CLEC17AQ6ZS10 378 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 CDC5LQ99459 802 aaKnown RBP19.79■□□□□ 0.76
ATG4B-225ENST00000494465 DSCC1Q9BVC3 393 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 NYXQ9GZU5 481 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 ZFYP08048 801 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-225ENST00000494465 SLC5A1P13866 664 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 CHRNDQ07001 517 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 LARP6Q9BRS8 491 aaKnown RBP19.79■□□□□ 0.76
ATG4B-225ENST00000494465 ZDHHC9Q9Y397 364 aa19.79■□□□□ 0.76
ATG4B-225ENST00000494465 PSMA5P28066 241 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 LAMA4Q16363 1823 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 CYP21A2P08686 494 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 UQCRFS1P1P0C7P4 283 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 HSPD1P10809 573 aaKnown RBP19.78■□□□□ 0.76
ATG4B-225ENST00000494465 LRRFIP1Q32MZ4 808 aaKnown RBP19.78■□□□□ 0.76
ATG4B-225ENST00000494465 TRAPPC3LQ5T215 181 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 DOCK2Q92608 1830 aa19.78■□□□□ 0.76
ATG4B-225ENST00000494465 PHF14O94880 888 aa19.77■□□□□ 0.76
ATG4B-225ENST00000494465 NBPF5PQ86XG9 351 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-225ENST00000494465 LARGE1O95461 756 aa19.77■□□□□ 0.75
ATG4B-225ENST00000494465 GTF2E1P29083 439 aaPredicted RBP19.77■□□□□ 0.75
ATG4B-225ENST00000494465 RFC4P35249 363 aa19.77■□□□□ 0.75
ATG4B-225ENST00000494465 PIH1D3Q9NQM4 214 aaKnown RBP19.77■□□□□ 0.75
ATG4B-225ENST00000494465 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
ATG4B-225ENST00000494465 FOXP2O15409 715 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 RPS6KB1P23443 525 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 ANKRD18AQ8IVF6 992 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 APPBP2Q92624 585 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 GBP4Q96PP9 640 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 TRIM37O94972 964 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 BLOC1S2Q6QNY1 142 aa19.76■□□□□ 0.75
ATG4B-225ENST00000494465 ALDH8A1Q9H2A2 487 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-225ENST00000494465 BSDC1Q9NW68 430 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-225ENST00000494465 DEKP35659 375 aaKnown RBP19.75■□□□□ 0.75
ATG4B-225ENST00000494465 KRT32Q14532 448 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 TTF1Q15361 905 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-225ENST00000494465 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 CELF1Q92879 486 aaKnown RBP19.75■□□□□ 0.75
ATG4B-225ENST00000494465 PUS7LQ9H0K6 701 aaKnown RBP19.75■□□□□ 0.75
ATG4B-225ENST00000494465 DDX11L8A8MPP1 907 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 ADRA2BP18089 450 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 ADD2P35612 726 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 RASGRF1Q13972 1273 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 SLC27A3Q5K4L6 730 aa19.75■□□□□ 0.75
ATG4B-225ENST00000494465 STOX1Q6ZVD7 989 aa19.74■□□□□ 0.75
ATG4B-225ENST00000494465 CCDC24Q8N4L8 307 aa19.74■□□□□ 0.75
ATG4B-225ENST00000494465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
ATG4B-225ENST00000494465 A0A0G2JLW4 131 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 WASHC4Q2M389 1173 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 SPATA5Q8NB90 893 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■□□□ 13.4
ATG4B-225ENST00000494465 BAG4O95429 457 aaKnown RBP19.73■□□□□ 0.75
ATG4B-225ENST00000494465 BCAMP50895 628 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 ST3GAL1Q11201 340 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 NFIXQ14938 502 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 TCEANC2Q96MN5 208 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 MINPP1Q9UNW1 487 aa19.73■□□□□ 0.75
ATG4B-225ENST00000494465 WTIPA6NIX2 430 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-225ENST00000494465 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-225ENST00000494465 ME3Q16798 604 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 ZSCAN31Q96LW9 406 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-225ENST00000494465 NEK1Q96PY6 1258 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 TPCN1Q9ULQ1 816 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 CARMIL3Q8ND23 1372 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 TM4SF1P30408 202 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 SLC9C2Q5TAH2 1124 aa19.72■□□□□ 0.75
ATG4B-225ENST00000494465 SH2B1Q9NRF2 756 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-225ENST00000494465 TCRBV5S4A2TA0A5A2 114 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
ATG4B-225ENST00000494465 GSE1Q14687 1217 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 ZSCAN25Q6NSZ9 544 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 PROM2Q8N271 834 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 BRD1O95696 1058 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
ATG4B-225ENST00000494465 ZNF804BA4D1E1 1349 aa19.7■□□□□ 0.74
ATG4B-225ENST00000494465 GPAA1O43292 621 aa19.7■□□□□ 0.74
ATG4B-225ENST00000494465 IDH1O75874 414 aaKnown RBP19.7■□□□□ 0.74
ATG4B-225ENST00000494465 PDE6AP16499 860 aa19.7■□□□□ 0.74
ATG4B-225ENST00000494465 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
ATG4B-225ENST00000494465 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms