RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
MSH5-217ENST00000494458 FLAD1Q8NFF5 587 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 ANTXR1Q9H6X2 564 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 CNNM1Q9NRU3 951 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 COL4A1P02462 1669 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 ZNF804BA4D1E1 1349 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 IRS2Q9Y4H2 1338 aa8.23□□□□□ -1.09
MSH5-217ENST00000494458 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
MSH5-217ENST00000494458 POLRMTO00411 1230 aaKnown RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 IGSF3O75054 1194 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 TAF5LO75529 589 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 MAP4K4O95819 1239 aaPredicted RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 APBA3O96018 575 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 CHRNDQ07001 517 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 UBE4AQ14139 1066 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 BECN1Q14457 450 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 ZMYM1Q5SVZ6 1142 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 PRR5LQ6MZQ0 368 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 C15orf52Q6ZUT6 534 aaKnown RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 NEUROD6Q96NK8 337 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
MSH5-217ENST00000494458 HELLSQ9NRZ9 838 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 PAG1Q9NWQ8 432 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 MINPP1Q9UNW1 487 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 ARAP2Q8WZ64 1704 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 NRXN2Q9P2S2 1712 aa8.22□□□□□ -1.09
MSH5-217ENST00000494458 AKAP11Q9UKA4 1901 aa8.21□□□□□ -1.09
MSH5-217ENST00000494458 A0A0D9SFI3 127 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 IFIT1P09914 478 aaKnown RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 UQCRFS1P1P0C7P4 283 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 MCAMP43121 646 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 DDR1Q08345 913 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 SCARF1Q14162 830 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 CWC27Q6UX04 472 aaKnown RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 COL23A1Q86Y22 540 aaPredicted RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 ANKRD18AQ8IVF6 992 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 CELF1Q92879 486 aaKnown RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 EDC3Q96F86 508 aaKnown RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 FAM227BQ96M60 508 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 MPHOSPH8Q99549 860 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 TM6SF1Q9BZW5 370 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 PDS5AQ29RF7 1337 aaKnown RBP8.21□□□□□ -1.1
MSH5-217ENST00000494458 CCDC171Q6TFL3 1326 aa8.21□□□□□ -1.1
MSH5-217ENST00000494458 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 RNF113AO15541 343 aaKnown RBP8.2□□□□□ -1.1
MSH5-217ENST00000494458 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
MSH5-217ENST00000494458 SERPINB2P05120 415 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 ZFYP08048 801 aaPredicted RBP8.2□□□□□ -1.1
MSH5-217ENST00000494458 SLC5A1P13866 664 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 PTH1RQ03431 593 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 MCMDC2Q4G0Z9 681 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 FBXO33Q7Z6M2 555 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 ALDH8A1Q9H2A2 487 aaPredicted RBP8.2□□□□□ -1.1
MSH5-217ENST00000494458 ANO2Q9NQ90 1003 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 DIAPH3Q9NSV4 1193 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 PALD1Q9ULE6 856 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 AK9Q5TCS8 1911 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 PNPLA7Q6ZV29 1317 aa8.2□□□□□ -1.1
MSH5-217ENST00000494458 TCRBV5S4A2TA0A5A2 114 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 POTEFA5A3E0 1075 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 GOLIM4O00461 696 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 CYP2E1P05181 493 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 ZAP70P43403 619 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 PHKA1P46020 1223 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 GRAPQ13588 217 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 TTF1Q15361 905 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 UBE3CQ15386 1083 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 TTC39AQ5SRH9 613 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 ZNF589Q86UQ0 364 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 RASEFQ8IZ41 740 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 GRAPLQ8TC17 118 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 FAM84BQ96KN1 310 aaPredicted RBP8.19□□□□□ -1.1
MSH5-217ENST00000494458 TTC14Q96N46 770 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 CRAMP1Q96RY5 1269 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 FSD1Q9BTV5 496 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 DSCC1Q9BVC3 393 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 BRIP1Q9BX63 1249 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 BCL11AQ9H165 835 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
MSH5-217ENST00000494458 TNRC6CQ9HCJ0 1690 aaKnown RBP8.18□□□□□ -1.1
MSH5-217ENST00000494458 QSER1Q2KHR3 1735 aa8.18□□□□□ -1.1
MSH5-217ENST00000494458 A0A1B0GUL6 1792 aa8.18□□□□□ -1.1
MSH5-217ENST00000494458 CASZ1Q86V15 1759 aa8.18□□□□□ -1.1
MSH5-217ENST00000494458 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
MSH5-217ENST00000494458 SEMA3EO15041 775 aa8.18□□□□□ -1.1
MSH5-217ENST00000494458 FOXP2O15409 715 aa8.18□□□□□ -1.1
MSH5-217ENST00000494458 BBOX1O75936 387 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms