RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
RIF1-211ENST00000494333 FAM208AQ9UK61 1670 aaKnown RBP10.99□□□□□ -0.65
RIF1-211ENST00000494333 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
RIF1-211ENST00000494333 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 Q6ZNB5 142 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 SPG7Q9UQ90 795 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 NSD2O96028 1365 aa10.99□□□□□ -0.65
RIF1-211ENST00000494333 LRP5O75197 1615 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 AXIN1O15169 862 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 NCOA4Q13772 614 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 MPRIPQ6WCQ1 1025 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 PLEKHM2Q8IWE5 1019 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
RIF1-211ENST00000494333 USP4Q13107 963 aa10.97□□□□□ -0.65
RIF1-211ENST00000494333 ZNF827Q17R98 1081 aa10.97□□□□□ -0.65
RIF1-211ENST00000494333 Q6ZVU0 165 aa10.97□□□□□ -0.65
RIF1-211ENST00000494333 AAASQ9NRG9 546 aa10.97□□□□□ -0.65
RIF1-211ENST00000494333 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.65
RIF1-211ENST00000494333 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.65
RIF1-211ENST00000494333 RGPD4Q7Z3J3 1758 aa10.96□□□□□ -0.65
RIF1-211ENST00000494333 LZTS3O60299 673 aaPredicted RBP10.96□□□□□ -0.65
RIF1-211ENST00000494333 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.65
RIF1-211ENST00000494333 LMOD1P29536 600 aaPredicted RBP10.96□□□□□ -0.65
RIF1-211ENST00000494333 EML3Q32P44 896 aa10.96□□□□□ -0.65
RIF1-211ENST00000494333 CCNL1Q9UK58 526 aaPredicted RBP10.96□□□□□ -0.65
RIF1-211ENST00000494333 LCE2BO14633 110 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
RIF1-211ENST00000494333 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
RIF1-211ENST00000494333 IFNL2Q8IZJ0 200 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 MEIOBQ8N635 442 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 MTFR1LQ9H019 292 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 TFCP2L1Q9NZI6 479 aa10.95□□□□□ -0.66
RIF1-211ENST00000494333 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 IGSF1Q8N6C5 1336 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 PHKG2P15735 406 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 MTHFSP49914 203 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 PIGBQ92521 554 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 AGBL1Q96MI9 1066 aa10.94□□□□□ -0.66
RIF1-211ENST00000494333 BTAF1O14981 1849 aa10.93□□□□□ -0.66
RIF1-211ENST00000494333 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
RIF1-211ENST00000494333 ADH1AP07327 375 aa10.93□□□□□ -0.66
RIF1-211ENST00000494333 RFX1P22670 979 aa10.93□□□□□ -0.66
RIF1-211ENST00000494333 PLEKHO1Q53GL0 409 aaPredicted RBP10.93□□□□□ -0.66
RIF1-211ENST00000494333 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
RIF1-211ENST00000494333 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
RIF1-211ENST00000494333 NOD1Q9Y239 953 aa10.93□□□□□ -0.66
RIF1-211ENST00000494333 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 BMP1P13497 986 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 IL13P35225 146 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 SULT6B1Q6IMI4 303 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 AEBP1Q8IUX7 1158 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 KDF1Q8NAX2 398 aaPredicted RBP10.92□□□□□ -0.66
RIF1-211ENST00000494333 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
RIF1-211ENST00000494333 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
RIF1-211ENST00000494333 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
RIF1-211ENST00000494333 HMGB2P26583 209 aaKnown RBP10.91□□□□□ -0.66
RIF1-211ENST00000494333 AMOTQ4VCS5 1084 aa10.91□□□□□ -0.66
RIF1-211ENST00000494333 MRPL14Q6P1L8 145 aaKnown RBP10.91□□□□□ -0.66
RIF1-211ENST00000494333 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
RIF1-211ENST00000494333 TRIM46Q7Z4K8 759 aa10.91□□□□□ -0.66
RIF1-211ENST00000494333 SHANK3Q9BYB0 1731 aa10.91□□□□□ -0.66
RIF1-211ENST00000494333 DOT1LQ8TEK3 1739 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ANKRD26Q9UPS8 1709 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
RIF1-211ENST00000494333 RELBQ01201 579 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ZNF530Q6P9A1 599 aaPredicted RBP10.9□□□□□ -0.66
RIF1-211ENST00000494333 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ARXQ96QS3 562 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ARID3AQ99856 593 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 TSEN34Q9BSV6 310 aaKnown RBP10.9□□□□□ -0.66
RIF1-211ENST00000494333 SYT17Q9BSW7 474 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 FHDC1Q9C0D6 1143 aaPredicted RBP10.9□□□□□ -0.66
RIF1-211ENST00000494333 ASAP1Q9ULH1 1129 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 PCDHGA11Q9Y5H2 935 aa10.9□□□□□ -0.66
RIF1-211ENST00000494333 ERVV-2B6SEH9 535 aa10.89□□□□□ -0.67
RIF1-211ENST00000494333 PTGIRP43119 386 aa10.89□□□□□ -0.67
RIF1-211ENST00000494333 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
RIF1-211ENST00000494333 ZNF395Q9H8N7 513 aaPredicted RBP10.89□□□□□ -0.67
RIF1-211ENST00000494333 ATP13A2Q9NQ11 1180 aa10.89□□□□□ -0.67
RIF1-211ENST00000494333 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
RIF1-211ENST00000494333 PLEKHG2Q9H7P9 1386 aa10.89□□□□□ -0.67
RIF1-211ENST00000494333 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 CASZ1Q86V15 1759 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 DIAPH1O60610 1272 aaKnown RBP10.88□□□□□ -0.67
RIF1-211ENST00000494333 UPP2O95045 317 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 HMOX1P09601 288 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 POLD1P28340 1107 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms