RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 CCDC40Q4G0X9 1142 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 SNX21Q969T3 373 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 USP26Q9BXU7 913 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 CCDC129Q6ZRS4 1044 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
COL25A1-204ENST00000494183 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 VPS36Q86VN1 386 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 CENPHQ9H3R5 247 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 SAMD9Q5K651 1589 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 ZSCAN12O43309 604 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 USP21Q9UK80 565 aa13.41□□□□□ -0.26
COL25A1-204ENST00000494183 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
COL25A1-204ENST00000494183 ERLIN1O75477 346 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 UFL1O94874 794 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 F13A1P00488 732 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
COL25A1-204ENST00000494183 METP08581 1390 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
COL25A1-204ENST00000494183 PYM1Q9BRP8 204 aaKnown RBP13.4□□□□□ -0.26
COL25A1-204ENST00000494183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL25A1-204ENST00000494183 BMP15O95972 392 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 DNA2P51530 1060 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 TRAF1Q13077 416 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 HSP90AA4PQ58FG1 418 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
COL25A1-204ENST00000494183 TRIM75PA6NK02 468 aa13.4□□□□□ -0.27
COL25A1-204ENST00000494183 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.27
COL25A1-204ENST00000494183 ADCY5O95622 1261 aa13.4□□□□□ -0.27
COL25A1-204ENST00000494183 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.27
COL25A1-204ENST00000494183 SYCP3Q8IZU3 236 aa13.4□□□□□ -0.27
COL25A1-204ENST00000494183 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.27
COL25A1-204ENST00000494183 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.27
COL25A1-204ENST00000494183 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 CETN1Q12798 172 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 RAD50Q92878 1312 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 USP8P40818 1118 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 UQCRHLA0A096LP55 91 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 UQCRHP07919 91 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 DESP17661 470 aa13.39□□□□□ -0.27
COL25A1-204ENST00000494183 N4BP3O15049 544 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 CALM1P0DP23 149 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 CALM2P0DP24 149 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 CALM3P0DP25 149 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 TEX11Q8IYF3 940 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 TMEM94Q12767 1356 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 YEATS4O95619 227 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 PHKG2P15735 406 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 RBM17Q96I25 401 aaKnown RBP13.38□□□□□ -0.27
COL25A1-204ENST00000494183 TRIM47Q96LD4 638 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 FAM227BQ96M60 508 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 SPTLC2O15270 562 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 KIF5CO60282 957 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 CAVIN2O95810 425 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 ZSCAN23Q3MJ62 389 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 B4E1Z4 1266 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 PRDM1O75626 825 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
COL25A1-204ENST00000494183 KIF2AO00139 706 aaPredicted RBP13.37□□□□□ -0.27
COL25A1-204ENST00000494183 CALML3P27482 149 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 STAT6P42226 847 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 TNNI2P48788 182 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 STK32BQ9NY57 414 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 TBCAO75347 108 aaKnown RBP13.37□□□□□ -0.27
COL25A1-204ENST00000494183 CETN2P41208 172 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 GRM1Q13255 1194 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL25A1-204ENST00000494183 FAM193AP78312 1265 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 TCIRG1Q13488 830 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 APPBP2Q92624 585 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
COL25A1-204ENST00000494183 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 EXOC1Q9NV70 894 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 GPAA1O43292 621 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 KBTBD3Q8NAB2 608 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 C16orf45Q96MC5 204 aaPredicted RBP13.36□□□□□ -0.27
COL25A1-204ENST00000494183 TRIM21P19474 475 aaKnown RBP13.36□□□□□ -0.27
COL25A1-204ENST00000494183 LPIN2Q92539 896 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 SAP30BPQ9UHR5 308 aaKnown RBP13.36□□□□□ -0.27
COL25A1-204ENST00000494183 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
COL25A1-204ENST00000494183 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms