RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ADM5C9JUS6 153 aa17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 MRPL50Q8N5N7 158 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 AGBL3Q8NEM8 1001 aa17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 KAZALD1Q96I82 304 aa17.02■□□□□ 0.32
CTDSP1-212ENST00000494067 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 ZNF280AP59817 542 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 SAPCD2Q86UD0 394 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 ANKRD2Q9GZV1 360 aa17.01■□□□□ 0.31
CTDSP1-212ENST00000494067 GRM8O00222 908 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 MAP2K2P36507 400 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 CHRNDQ07001 517 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 SLFN5Q08AF3 891 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 SULF1Q8IWU6 871 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
CTDSP1-212ENST00000494067 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
CTDSP1-212ENST00000494067 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 AOC2O75106 756 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 TAF5LO75529 589 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 CAPN15O75808 1086 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 KCNJ4P48050 445 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 SUCLG2Q96I99 432 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-212ENST00000494067 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 LBX1P52954 281 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 OGFOD1Q8N543 542 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 FBXW7Q969H0 707 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
CTDSP1-212ENST00000494067 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-212ENST00000494067 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-212ENST00000494067 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
CTDSP1-212ENST00000494067 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 E9PSI1 815 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 HUNKP57058 714 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 MYOZ2Q9NPC6 264 aa16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-212ENST00000494067 UTYO14607 1347 aa16.96■□□□□ 0.3
CTDSP1-212ENST00000494067 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 MMP14P50281 582 aa16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 SCARF1Q14162 830 aa16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-212ENST00000494067 CA12O43570 354 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 NOGQ13253 232 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 CCDC57Q2TAC2 916 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 CERS5Q8N5B7 392 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
CTDSP1-212ENST00000494067 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 CCDC102AQ96A19 550 aa16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
CTDSP1-212ENST00000494067 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 FAM155AB1AL88 458 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 GTF2IP78347 998 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
CTDSP1-212ENST00000494067 SASH1O94885 1247 aa16.91■□□□□ 0.3
CTDSP1-212ENST00000494067 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
CTDSP1-212ENST00000494067 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
CTDSP1-212ENST00000494067 PTPRCP08575 1304 aa16.91■□□□□ 0.3
CTDSP1-212ENST00000494067 AOX1Q06278 1338 aa16.91■□□□□ 0.3
CTDSP1-212ENST00000494067 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 WNT10BO00744 389 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 PLIN1O60240 522 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 RABL6Q3YEC7 729 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 ZBED3Q96IU2 234 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 USP44Q9H0E7 712 aa16.9■□□□□ 0.3
CTDSP1-212ENST00000494067 CNNM1Q9NRU3 951 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms