RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
RFC4-214ENST00000494047 A0A0D9SFI3 127 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 H3BQV1 296 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
RFC4-214ENST00000494047 PROSER3Q2NL68 480 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 DNTTIP2Q5QJE6 756 aaKnown RBP13.52□□□□□ -0.25
RFC4-214ENST00000494047 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 COPS6Q7L5N1 327 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 PIGBQ92521 554 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 MYD88Q99836 296 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 WDR19Q8NEZ3 1342 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 SRCAPQ6ZRS2 3230 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 TOGARAM1Q9Y4F4 1720 aa13.52□□□□□ -0.25
RFC4-214ENST00000494047 ANXA1P04083 346 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
RFC4-214ENST00000494047 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
RFC4-214ENST00000494047 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 CCDC8Q9H0W5 538 aaPredicted RBP13.51□□□□□ -0.25
RFC4-214ENST00000494047 CLSTN2Q9H4D0 955 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 GDPD2Q9HCC8 539 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 QSER1Q2KHR3 1735 aa13.51□□□□□ -0.25
RFC4-214ENST00000494047 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 PFKFB2O60825 505 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
RFC4-214ENST00000494047 FGD1P98174 961 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
RFC4-214ENST00000494047 DHX32Q7L7V1 743 aaKnown RBP13.5□□□□□ -0.25
RFC4-214ENST00000494047 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
RFC4-214ENST00000494047 LARGE1O95461 756 aa13.49□□□□□ -0.25
RFC4-214ENST00000494047 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 CABP4P57796 275 aa13.49□□□□□ -0.25
RFC4-214ENST00000494047 TYRO3Q06418 890 aa13.49□□□□□ -0.25
RFC4-214ENST00000494047 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
RFC4-214ENST00000494047 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 LEO1Q8WVC0 666 aaPredicted RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 NAT10Q9H0A0 1025 aaKnown RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
RFC4-214ENST00000494047 ZNF609O15014 1411 aa13.49□□□□□ -0.25
RFC4-214ENST00000494047 A0A087WZG4 1122 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 SYCP1Q15431 976 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 CDC37L1Q7L3B6 337 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 TTC6Q86TZ1 520 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
RFC4-214ENST00000494047 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 TJP1Q07157 1748 aa13.48□□□□□ -0.25
RFC4-214ENST00000494047 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 H7C1W4 665 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 NRDCO43847 1150 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 TUBB4AP04350 444 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 ZSCAN25Q6NSZ9 544 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 SIL1Q9H173 461 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 TAF1LQ8IZX4 1826 aa13.47□□□□□ -0.25
RFC4-214ENST00000494047 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
RFC4-214ENST00000494047 MYL6BP14649 208 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 SIK1P57059 783 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 ST3GAL1Q11201 340 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 RESTQ13127 1097 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 STX1AQ16623 288 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 ZNF827Q17R98 1081 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
RFC4-214ENST00000494047 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 ZNF831Q5JPB2 1677 aa13.46□□□□□ -0.25
RFC4-214ENST00000494047 KINO60870 393 aaKnown RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 CASP7P55210 303 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 EVCP57679 992 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 TPM4P67936 248 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 TFCP2Q12800 502 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 ZMYM1Q5SVZ6 1142 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 BRAPQ7Z569 592 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 KIAA1524Q8TCG1 905 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 EYA2O00167 538 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 MYO1BO43795 1136 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 TRIM28Q13263 835 aaKnown RBP13.45□□□□□ -0.26
RFC4-214ENST00000494047 CCDC158Q5M9N0 1113 aa13.45□□□□□ -0.26
RFC4-214ENST00000494047 Q6ZUG5 572 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms