RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 USP17L3A6NCW0 530 aa28.39■■■□□ 2.14
SNIP1-203ENST00000493916 USP17L4A6NCW7 530 aa28.39■■■□□ 2.14
SNIP1-203ENST00000493916 HTRA3P83110 453 aa28.39■■■□□ 2.14
SNIP1-203ENST00000493916 RSBN1LQ6PCB5 846 aaPredicted RBP28.39■■■□□ 2.14
SNIP1-203ENST00000493916 USP17L1Q7RTZ2 530 aa28.39■■■□□ 2.14
SNIP1-203ENST00000493916 AGBL3Q8NEM8 1001 aa28.39■■■□□ 2.14
SNIP1-203ENST00000493916 ZNF646O15015 1829 aaPredicted RBP28.39■■■□□ 2.13
SNIP1-203ENST00000493916 TRPM4Q8TD43 1214 aa28.38■■■□□ 2.13
SNIP1-203ENST00000493916 HDAC5Q9UQL6 1122 aa28.38■■■□□ 2.13
SNIP1-203ENST00000493916 ZC3H15Q8WU90 426 aaKnown RBP28.37■■■□□ 2.13
SNIP1-203ENST00000493916 FRAT1Q92837 279 aaPredicted RBP28.37■■■□□ 2.13
SNIP1-203ENST00000493916 PUS3Q9BZE2 481 aaKnown RBP28.37■■■□□ 2.13
SNIP1-203ENST00000493916 PGAP2Q9UHJ9 254 aa28.37■■■□□ 2.13
SNIP1-203ENST00000493916 RIPOR2Q9Y4F9 1068 aa28.37■■■□□ 2.13
SNIP1-203ENST00000493916 MROH5Q6ZUA9 1318 aa28.37■■■□□ 2.13
SNIP1-203ENST00000493916 SNAP23O00161 211 aa28.36■■■□□ 2.13
SNIP1-203ENST00000493916 HIRAP54198 1017 aaPredicted RBP28.36■■■□□ 2.13
SNIP1-203ENST00000493916 GMLQ99445 158 aa28.36■■■□□ 2.13
SNIP1-203ENST00000493916 CREBZFQ9NS37 354 aa28.36■■■□□ 2.13
SNIP1-203ENST00000493916 MEIS3Q99687 375 aa28.35■■■□□ 2.13
SNIP1-203ENST00000493916 ZNF280AP59817 542 aaPredicted RBP28.34■■■□□ 2.13
SNIP1-203ENST00000493916 UBE4AQ14139 1066 aa28.34■■■□□ 2.13
SNIP1-203ENST00000493916 DACT2Q5SW24 774 aa28.34■■■□□ 2.13
SNIP1-203ENST00000493916 STRIP1Q5VSL9 837 aa28.34■■■□□ 2.13
SNIP1-203ENST00000493916 ZKSCAN2Q63HK3 967 aa28.34■■■□□ 2.13
SNIP1-203ENST00000493916 PLIN1O60240 522 aa28.33■■■□□ 2.13
SNIP1-203ENST00000493916 RFX5P48382 616 aaPredicted RBP28.33■■■□□ 2.13
SNIP1-203ENST00000493916 SAMD7Q7Z3H4 446 aa28.33■■■□□ 2.13
SNIP1-203ENST00000493916 KLRG1Q96E93 195 aa28.33■■■□□ 2.13
SNIP1-203ENST00000493916 CD209Q9NNX6 404 aa28.33■■■□□ 2.13
SNIP1-203ENST00000493916 LRRFIP2Q9Y608 721 aaKnown RBP28.33■■■□□ 2.13
SNIP1-203ENST00000493916 GNAI3P08754 354 aa28.32■■■□□ 2.12
SNIP1-203ENST00000493916 LRRC24Q50LG9 513 aa28.32■■■□□ 2.12
SNIP1-203ENST00000493916 ZNF804AQ7Z570 1209 aa28.32■■■□□ 2.12
SNIP1-203ENST00000493916 TNNQ9UQP3 1299 aa28.32■■■□□ 2.12
SNIP1-203ENST00000493916 MYO3BQ8WXR4 1341 aa28.32■■■□□ 2.12
SNIP1-203ENST00000493916 EGFRP00533 1210 aa28.31■■■□□ 2.12
SNIP1-203ENST00000493916 TBC1D10BQ4KMP7 808 aaPredicted RBP28.31■■■□□ 2.12
SNIP1-203ENST00000493916 KLHDC4Q8TBB5 520 aa28.31■■■□□ 2.12
SNIP1-203ENST00000493916 TMEM88BA6NKF7 163 aa28.3■■■□□ 2.12
SNIP1-203ENST00000493916 IL1R1P14778 569 aa28.3■■■□□ 2.12
SNIP1-203ENST00000493916 VGLL2Q8N8G2 317 aa28.3■■■□□ 2.12
SNIP1-203ENST00000493916 USP17L8P0C7I0 530 aa28.29■■■□□ 2.12
SNIP1-203ENST00000493916 PTPN12Q05209 780 aaKnown RBP28.29■■■□□ 2.12
SNIP1-203ENST00000493916 KIF4BQ2VIQ3 1234 aa28.29■■■□□ 2.12
SNIP1-203ENST00000493916 METTL24Q5JXM2 366 aa28.29■■■□□ 2.12
SNIP1-203ENST00000493916 TTLL5Q6EMB2 1281 aa28.29■■■□□ 2.12
SNIP1-203ENST00000493916 CLUAP1Q96AJ1 413 aa28.29■■■□□ 2.12
SNIP1-203ENST00000493916 FBXW7Q969H0 707 aa28.28■■■□□ 2.12
SNIP1-203ENST00000493916 EYA2O00167 538 aa28.27■■■□□ 2.12
SNIP1-203ENST00000493916 PDE8BO95263 885 aa28.27■■■□□ 2.12
SNIP1-203ENST00000493916 MMP14P50281 582 aa28.27■■■□□ 2.12
SNIP1-203ENST00000493916 MXD3Q9BW11 206 aa28.27■■■□□ 2.12
SNIP1-203ENST00000493916 FBXO3Q9UK99 471 aa28.27■■■□□ 2.12
SNIP1-203ENST00000493916 GTF2IP78347 998 aa28.26■■■□□ 2.11
SNIP1-203ENST00000493916 RBM26Q5T8P6 1007 aaKnown RBP28.26■■■□□ 2.11
SNIP1-203ENST00000493916 TRAF5O00463 557 aa28.25■■■□□ 2.11
SNIP1-203ENST00000493916 CDC37L1Q7L3B6 337 aa28.25■■■□□ 2.11
SNIP1-203ENST00000493916 TMEM57Q8N5G2 664 aa28.25■■■□□ 2.11
SNIP1-203ENST00000493916 GLIS2Q9BZE0 524 aaPredicted RBP28.25■■■□□ 2.11
SNIP1-203ENST00000493916 MYOZ2Q9NPC6 264 aa28.25■■■□□ 2.11
SNIP1-203ENST00000493916 CIAO1O76071 339 aa28.24■■■□□ 2.11
SNIP1-203ENST00000493916 MTX1Q13505 466 aa28.24■■■□□ 2.11
SNIP1-203ENST00000493916 JMYQ8N9B5 988 aa28.24■■■□□ 2.11
SNIP1-203ENST00000493916 TRPM7Q96QT4 1865 aa28.23■■■□□ 2.11
SNIP1-203ENST00000493916 ATG9AQ7Z3C6 839 aa28.23■■■□□ 2.11
SNIP1-203ENST00000493916 FTSJ3Q8IY81 847 aaKnown RBP28.23■■■□□ 2.11
SNIP1-203ENST00000493916 OGFOD1Q8N543 542 aa28.23■■■□□ 2.11
SNIP1-203ENST00000493916 FAM84BQ96KN1 310 aaPredicted RBP28.23■■■□□ 2.11
SNIP1-203ENST00000493916 CNTNAP1P78357 1384 aa28.23■■■□□ 2.11
SNIP1-203ENST00000493916 HIBADHP31937 336 aaKnown RBP28.22■■■□□ 2.11
SNIP1-203ENST00000493916 GYG1P46976 350 aa28.22■■■□□ 2.11
SNIP1-203ENST00000493916 FKBP1AP62942 108 aaKnown RBP28.22■■■□□ 2.11
SNIP1-203ENST00000493916 FMR1Q06787 632 aaKnown RBP eCLIP28.22■■■□□ 2.11
SNIP1-203ENST00000493916 PUM3Q15397 648 aaKnown RBP28.22■■■□□ 2.11
SNIP1-203ENST00000493916 DZIP1LQ8IYY4 767 aaKnown RBP28.22■■■□□ 2.11
SNIP1-203ENST00000493916 SASH1O94885 1247 aa28.21■■■□□ 2.11
SNIP1-203ENST00000493916 GNAI2P04899 355 aa28.21■■■□□ 2.11
SNIP1-203ENST00000493916 TDRD7Q8NHU6 1098 aaKnown RBP28.21■■■□□ 2.11
SNIP1-203ENST00000493916 DCPSQ96C86 337 aaKnown RBP28.21■■■□□ 2.11
SNIP1-203ENST00000493916 COPRSQ9NQ92 184 aa28.21■■■□□ 2.11
SNIP1-203ENST00000493916 FAM205AQ6ZU69 1335 aa28.2■■■□□ 2.11
SNIP1-203ENST00000493916 FGFR2P21802 821 aa28.2■■■□□ 2.1
SNIP1-203ENST00000493916 CST9Q5W186 159 aa28.2■■■□□ 2.1
SNIP1-203ENST00000493916 FBXO33Q7Z6M2 555 aa28.2■■■□□ 2.1
SNIP1-203ENST00000493916 CERS5Q8N5B7 392 aa28.2■■■□□ 2.1
SNIP1-203ENST00000493916 GGA3Q9NZ52 723 aa28.2■■■□□ 2.1
SNIP1-203ENST00000493916 SCARF1Q14162 830 aa28.19■■■□□ 2.1
SNIP1-203ENST00000493916 KRT26Q7Z3Y9 468 aa28.19■■■□□ 2.1
SNIP1-203ENST00000493916 USP48Q86UV5 1035 aa28.19■■■□□ 2.1
SNIP1-203ENST00000493916 SIL1Q9H173 461 aa28.19■■■□□ 2.1
SNIP1-203ENST00000493916 HDAC9Q9UKV0 1011 aa28.19■■■□□ 2.1
SNIP1-203ENST00000493916 ASTN2O75129 1339 aaPredicted RBP28.18■■■□□ 2.1
SNIP1-203ENST00000493916 RASSF10A6NK89 507 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 SRGAP3O43295 1099 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 RLBP1P12271 317 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 IL15P40933 162 aaPredicted RBP28.18■■■□□ 2.1
SNIP1-203ENST00000493916 CAVIN4Q5BKX8 364 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 KIAA0825Q8IV33 1275 aa28.18■■■□□ 2.1
SNIP1-203ENST00000493916 MKRN1Q9UHC7 482 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms