RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RIPOR2Q9Y4F9 1068 aa16.38■□□□□ 0.21
VCP-207ENST00000493886 SLIT2O94813 1529 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 RIC1Q4ADV7 1423 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 PDE8AO60658 829 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 SYT1P21579 422 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 STX6O43752 255 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 TOM1O60784 492 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
VCP-207ENST00000493886 SIK1P57059 783 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
VCP-207ENST00000493886 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
VCP-207ENST00000493886 GJB2P29033 226 aa16.36■□□□□ 0.21
VCP-207ENST00000493886 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
VCP-207ENST00000493886 MPNDQ8N594 471 aa16.36■□□□□ 0.21
VCP-207ENST00000493886 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
VCP-207ENST00000493886 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
VCP-207ENST00000493886 CYP21A2P08686 494 aa16.36■□□□□ 0.21
VCP-207ENST00000493886 ZSCAN22P10073 491 aaPredicted RBP16.36■□□□□ 0.21
VCP-207ENST00000493886 NEK1Q96PY6 1258 aa16.36■□□□□ 0.21
VCP-207ENST00000493886 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
VCP-207ENST00000493886 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
VCP-207ENST00000493886 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
VCP-207ENST00000493886 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
VCP-207ENST00000493886 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
VCP-207ENST00000493886 ITPK1Q13572 414 aa16.35■□□□□ 0.21
VCP-207ENST00000493886 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
VCP-207ENST00000493886 MAST3O60307 1309 aa16.34■□□□□ 0.21
VCP-207ENST00000493886 SCARF1Q14162 830 aa16.34■□□□□ 0.21
VCP-207ENST00000493886 MBD3O95983 291 aa16.33■□□□□ 0.21
VCP-207ENST00000493886 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.21
VCP-207ENST00000493886 CNPY4Q8N129 248 aa16.33■□□□□ 0.21
VCP-207ENST00000493886 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
VCP-207ENST00000493886 SUSD4Q5VX71 490 aa16.33■□□□□ 0.2
VCP-207ENST00000493886 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
VCP-207ENST00000493886 F13A1P00488 732 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 ZAP70P43403 619 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 M0R2C6 588 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 AK7Q96M32 723 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 MYH14Q7Z406 1995 aaKnown RBP16.32■□□□□ 0.2
VCP-207ENST00000493886 RREB1Q92766 1687 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 KCNQ2O43526 872 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
VCP-207ENST00000493886 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 SMARCC1Q92922 1105 aaPredicted RBP16.32■□□□□ 0.2
VCP-207ENST00000493886 MTMR6Q9Y217 621 aa16.32■□□□□ 0.2
VCP-207ENST00000493886 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
VCP-207ENST00000493886 FAM177BA6PVY3 158 aa16.31■□□□□ 0.2
VCP-207ENST00000493886 PDE8BO95263 885 aa16.31■□□□□ 0.2
VCP-207ENST00000493886 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
VCP-207ENST00000493886 PI16Q6UXB8 463 aa16.31■□□□□ 0.2
VCP-207ENST00000493886 USP48Q86UV5 1035 aa16.31■□□□□ 0.2
VCP-207ENST00000493886 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
VCP-207ENST00000493886 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
VCP-207ENST00000493886 FAM98CQ17RN3 349 aaKnown RBP16.3■□□□□ 0.2
VCP-207ENST00000493886 Q6ZUG5 572 aa16.3■□□□□ 0.2
VCP-207ENST00000493886 MCAMP43121 646 aa16.3■□□□□ 0.2
VCP-207ENST00000493886 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
VCP-207ENST00000493886 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
VCP-207ENST00000493886 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 STK3Q13188 491 aa16.29■□□□□ 0.2
VCP-207ENST00000493886 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
VCP-207ENST00000493886 TMEM87AQ8NBN3 555 aa16.29■□□□□ 0.2
VCP-207ENST00000493886 PDLIM2Q96JY6 352 aa16.29■□□□□ 0.2
VCP-207ENST00000493886 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 R3HCC1Q9Y3T6 440 aaKnown RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 ZNF512BQ96KM6 892 aaPredicted RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 LRP5O75197 1615 aa16.29■□□□□ 0.2
VCP-207ENST00000493886 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 LARP1BQ659C4 914 aaKnown RBP16.29■□□□□ 0.2
VCP-207ENST00000493886 AKAP11Q9UKA4 1901 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 LAMA4Q16363 1823 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 FIBPO43427 364 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
VCP-207ENST00000493886 APPBP2Q92624 585 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 C8orf37Q96NL8 207 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 KCNG1Q9UIX4 513 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
VCP-207ENST00000493886 MROH5Q6ZUA9 1318 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
VCP-207ENST00000493886 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
VCP-207ENST00000493886 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.2
VCP-207ENST00000493886 PDCP20941 246 aa16.27■□□□□ 0.2
VCP-207ENST00000493886 PUM3Q15397 648 aaKnown RBP16.27■□□□□ 0.2
VCP-207ENST00000493886 GTF3C6Q969F1 213 aa16.27■□□□□ 0.2
VCP-207ENST00000493886 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.2
VCP-207ENST00000493886 MYH7P12883 1935 aa16.27■□□□□ 0.19
VCP-207ENST00000493886 E7EWF7 191 aa16.27■□□□□ 0.19
VCP-207ENST00000493886 VPS72Q15906 364 aa16.27■□□□□ 0.19
VCP-207ENST00000493886 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.19
VCP-207ENST00000493886 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.19
VCP-207ENST00000493886 BRF1Q92994 677 aa16.27■□□□□ 0.19
VCP-207ENST00000493886 UBAP1LF5GYI3 381 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms