RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 SCARF1Q14162 830 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 CCDC102AQ96A19 550 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 CDCA5Q96FF9 252 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 GMLQ99445 158 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
NUDCD3-210ENST00000493613 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 CCDC85CA6NKD9 419 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 FLIIQ13045 1269 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 GCKRQ14397 625 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 MYH16Q9H6N6 1097 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
NUDCD3-210ENST00000493613 LAMB1P07942 1786 aa13.12□□□□□ -0.31
NUDCD3-210ENST00000493613 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-210ENST00000493613 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
NUDCD3-210ENST00000493613 ARAP2Q8WZ64 1704 aa13.12□□□□□ -0.31
NUDCD3-210ENST00000493613 ANP32CO43423 234 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 SLC10A3P09131 477 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 ITGA6P23229 1130 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 OGFOD1Q8N543 542 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 MCOLN1Q9GZU1 580 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
NUDCD3-210ENST00000493613 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 CASP7P55210 303 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 FKBP1BP68106 108 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 TXNRD3Q86VQ6 643 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 SAGE1Q9NXZ1 904 aa13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 SCAF8Q9UPN6 1271 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-210ENST00000493613 VAMP4O75379 141 aa13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 CSF1RP07333 972 aa13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 DGKZQ13574 1117 aa13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 MYH13Q9UKX3 1938 aa13.09□□□□□ -0.31
NUDCD3-210ENST00000493613 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 WNT10BO00744 389 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 TRPA1O75762 1119 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 KLRK1P26718 216 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 KCNJ4P48050 445 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 CHRNDQ07001 517 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 RNF186Q9NXI6 227 aa13.08□□□□□ -0.32
NUDCD3-210ENST00000493613 ANKRD18BA2A2Z9 1011 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 MOB2Q70IA6 237 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 CSRNP1Q96S65 589 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
NUDCD3-210ENST00000493613 F6X3S4 739 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 SASH1O94885 1247 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 NF2P35240 595 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 MMP14P50281 582 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 GTF2IP78347 998 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 FOXO4P98177 505 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 MLLT1Q03111 559 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 TTLL12Q14166 644 aaPredicted RBP13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
NUDCD3-210ENST00000493613 UBE2Q2LH0YL09 131 aa13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 TAF5LO75529 589 aa13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 RGS19P49795 217 aa13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 CD209Q9NNX6 404 aa13.05□□□□□ -0.32
NUDCD3-210ENST00000493613 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 SNAP23O00161 211 aa13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 FAM9BQ8IZU0 186 aa13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
NUDCD3-210ENST00000493613 GRM8O00222 908 aa13.03□□□□□ -0.32
NUDCD3-210ENST00000493613 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
NUDCD3-210ENST00000493613 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
NUDCD3-210ENST00000493613 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-210ENST00000493613 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
NUDCD3-210ENST00000493613 PRKG1Q13976 671 aa13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 DLGAP5Q15398 846 aa13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 LDHAL6AQ6ZMR3 332 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms