RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ARL10Q8N8L6 244 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 PSD3Q9NYI0 1048 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 CABP1Q9NZU7 370 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 TJP1Q07157 1748 aa7.94□□□□□ -1.14
VPS13B-205ENST00000493587 EME2A4GXA9 379 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 EBAG9O00559 213 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CDR1P51861 262 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 EVCP57679 992 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 C1QTNF12Q5T7M4 302 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 MEX3CQ5U5Q3 659 aaKnown RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 LRRC31Q6UY01 552 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 TMX4Q9H1E5 349 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 RABEP2Q9H5N1 569 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 MYO6Q9UM54 1294 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 MRC1P22897 1456 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CDC45O75419 566 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 RARSP54136 660 aaKnown RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 INHBEP58166 350 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 PDCD2Q16342 344 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 PROCA1Q8NCQ7 364 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 EPC1Q9H2F5 836 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 TMEM165Q9HC07 324 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CD248Q9HCU0 757 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 STAG3Q9UJ98 1225 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 KIF24Q5T7B8 1368 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 GOLGA6L4A6NEF3 574 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 NEK4P51957 841 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CRYMQ14894 314 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CCDC181Q5TID7 509 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 HHATQ5VTY9 493 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 MYLK4Q86YV6 388 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 LRRN4CLQ8ND94 238 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 ZNF483Q8TF39 744 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 KAT2BQ92831 832 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 CARD6Q9BX69 1037 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 BICC1Q9H694 974 aaKnown RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 PDE11AQ9HCR9 933 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 ORC3Q9UBD5 711 aaPredicted RBP7.93□□□□□ -1.14
VPS13B-205ENST00000493587 DNAI1Q9UI46 699 aa7.93□□□□□ -1.14
VPS13B-205ENST00000493587 SRGAP3O43295 1099 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 ATP8B1O43520 1251 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 COQ9O75208 318 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 RPSAP08865 295 aaKnown RBP7.92□□□□□ -1.14
VPS13B-205ENST00000493587 EZRP15311 586 aaKnown RBP7.92□□□□□ -1.14
VPS13B-205ENST00000493587 RPS6KA3P51812 740 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 CAMK4Q16566 473 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 SPDL1Q96EA4 605 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 BAG1Q99933 345 aaPredicted RBP7.92□□□□□ -1.14
VPS13B-205ENST00000493587 FAN1Q9Y2M0 1017 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 PPFIA4O75335 1185 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 KIF4AO95239 1232 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 CPP00450 1065 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 PAX3P23760 479 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 MVPQ14764 893 aaKnown RBP7.92□□□□□ -1.14
VPS13B-205ENST00000493587 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
VPS13B-205ENST00000493587 CNNM3Q8NE01 707 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 STAG1Q8WVM7 1258 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 SAAL1Q96ER3 474 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 ELP1O95163 1332 aa7.92□□□□□ -1.14
VPS13B-205ENST00000493587 RREB1Q92766 1687 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CHUKO15111 745 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 C21orf2O43822 256 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 SASH3O75995 380 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ZRANB2O95218 330 aaKnown RBP eCLIP7.91□□□□□ -1.14
VPS13B-205ENST00000493587 PYGLP06737 847 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ACTN3Q08043 901 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-205ENST00000493587 POTEDQ86YR6 584 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 MICAL1Q8TDZ2 1067 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CNPY2Q9Y2B0 182 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 COL22A1Q8NFW1 1626 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-205ENST00000493587 PPFIA2O75334 1257 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 TBC1D8O95759 1140 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CCT5P48643 541 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 DBN1Q16643 649 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CC2D1AQ6P1N0 951 aaPredicted RBP7.91□□□□□ -1.14
VPS13B-205ENST00000493587 NUTM1Q86Y26 1132 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 TATDN2Q93075 761 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ZNF232Q9UNY5 417 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CCDC69A6NI79 296 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ZNF75DP51815 510 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 BMP2KLQ5H9B9 411 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CHD1LQ86WJ1 897 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 SMC3Q9UQE7 1217 aa7.91□□□□□ -1.14
VPS13B-205ENST00000493587 ANKRD18BA2A2Z9 1011 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 BECN2A8MW95 431 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 ARID5BQ14865 1188 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 TCP11L2Q8N4U5 519 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 KCNB2Q92953 911 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 SCLT1Q96NL6 688 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 ZSWIM4Q9H7M6 989 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 RRP7AQ9Y3A4 280 aaKnown RBP7.9□□□□□ -1.14
VPS13B-205ENST00000493587 ADGRL3Q9HAR2 1447 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 ARHGEF10O15013 1369 aa7.9□□□□□ -1.14
VPS13B-205ENST00000493587 H3BQF6 201 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms