RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
SGIP1-213ENST00000493564 RIPOR2Q9Y4F9 1068 aa11.84□□□□□ -0.51
SGIP1-213ENST00000493564 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 ITGBL1O95965 494 aaPredicted RBP11.83□□□□□ -0.52
SGIP1-213ENST00000493564 EGFRP00533 1210 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
SGIP1-213ENST00000493564 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
SGIP1-213ENST00000493564 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.52
SGIP1-213ENST00000493564 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 COA1Q9GZY4 146 aa11.83□□□□□ -0.52
SGIP1-213ENST00000493564 MED23Q9ULK4 1368 aa11.82□□□□□ -0.52
SGIP1-213ENST00000493564 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
SGIP1-213ENST00000493564 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
SGIP1-213ENST00000493564 JAG2Q9Y219 1238 aa11.82□□□□□ -0.52
SGIP1-213ENST00000493564 SCN9AQ15858 1988 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 TRAF5O00463 557 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 RLBP1P12271 317 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 RFX5P48382 616 aaPredicted RBP11.81□□□□□ -0.52
SGIP1-213ENST00000493564 GTF2IP78347 998 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
SGIP1-213ENST00000493564 MAPK8IP2Q13387 824 aaPredicted RBP11.81□□□□□ -0.52
SGIP1-213ENST00000493564 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 DLK2Q6UY11 383 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 DPF2Q92785 391 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
SGIP1-213ENST00000493564 SIL1Q9H173 461 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 CD209Q9NNX6 404 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
SGIP1-213ENST00000493564 IRS2Q9Y4H2 1338 aa11.81□□□□□ -0.52
SGIP1-213ENST00000493564 GNAI3P08754 354 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
SGIP1-213ENST00000493564 GYG1P46976 350 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 DACT2Q5SW24 774 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
SGIP1-213ENST00000493564 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 MROH5Q6ZUA9 1318 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 PASKQ96RG2 1323 aa11.8□□□□□ -0.52
SGIP1-213ENST00000493564 EYA2O00167 538 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 PDE8BO95263 885 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 STRIP1Q5VSL9 837 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
SGIP1-213ENST00000493564 AGBL3Q8NEM8 1001 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 PANK1Q8TE04 598 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 GMLQ99445 158 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
SGIP1-213ENST00000493564 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
SGIP1-213ENST00000493564 HDAC5Q9UQL6 1122 aa11.79□□□□□ -0.52
SGIP1-213ENST00000493564 ASTN2O75129 1339 aaPredicted RBP11.79□□□□□ -0.52
SGIP1-213ENST00000493564 F8W031 263 aaPredicted RBP11.78□□□□□ -0.52
SGIP1-213ENST00000493564 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 GNAI2P04899 355 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 SCARF1Q14162 830 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 C15orf52Q6ZUT6 534 aaKnown RBP11.78□□□□□ -0.52
SGIP1-213ENST00000493564 ATG9AQ7Z3C6 839 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 VGLL2Q8N8G2 317 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
SGIP1-213ENST00000493564 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
SGIP1-213ENST00000493564 SCAF8Q9UPN6 1271 aaKnown RBP11.78□□□□□ -0.52
SGIP1-213ENST00000493564 IL1R1P14778 569 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
SGIP1-213ENST00000493564 BCAMP50895 628 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 VPS37DQ86XT2 251 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 MKRN1Q9UHC7 482 aaKnown RBP11.77□□□□□ -0.53
SGIP1-213ENST00000493564 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.53
SGIP1-213ENST00000493564 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
SGIP1-213ENST00000493564 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 CST9Q5W186 159 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
SGIP1-213ENST00000493564 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 ADAMTSL1Q8N6G6 1762 aa11.76□□□□□ -0.53
SGIP1-213ENST00000493564 ADM5C9JUS6 153 aa11.75□□□□□ -0.53
SGIP1-213ENST00000493564 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
SGIP1-213ENST00000493564 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
SGIP1-213ENST00000493564 SASH1O94885 1247 aa11.75□□□□□ -0.53
SGIP1-213ENST00000493564 CHAF1AQ13111 956 aaPredicted RBP11.75□□□□□ -0.53
SGIP1-213ENST00000493564 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
SGIP1-213ENST00000493564 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
SGIP1-213ENST00000493564 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms