RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 OPLAHO14841 1288 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 OGFOD2Q6N063 350 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 CLEC10AQ8IUN9 316 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 SHKBP1Q8TBC3 707 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 MYO19Q96H55 970 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 POM121Q96HA1 1249 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 FAM83CQ9BQN1 747 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 USP20Q9Y2K6 914 aa7.75□□□□□ -1.17
CLIP4-212ENST00000493551 LINC01387J3KSC0 135 aa7.74□□□□□ -1.17
CLIP4-212ENST00000493551 RAD21O60216 631 aa7.74□□□□□ -1.17
CLIP4-212ENST00000493551 LARP1Q6PKG0 1096 aaKnown RBP7.74□□□□□ -1.17
CLIP4-212ENST00000493551 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
CLIP4-212ENST00000493551 CMTR1Q8N1G2 835 aaKnown RBP7.74□□□□□ -1.17
CLIP4-212ENST00000493551 SHROOM2Q13796 1616 aa7.74□□□□□ -1.17
CLIP4-212ENST00000493551 FHAD1B1AJZ9 1412 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 SUPT5HO00267 1087 aaKnown RBP7.73□□□□□ -1.17
CLIP4-212ENST00000493551 FOXO3O43524 673 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 FAM20CQ8IXL6 584 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 ABI1Q8IZP0 508 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 VTI1AQ96AJ9 217 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 ABCC10Q5T3U5 1492 aa7.73□□□□□ -1.17
CLIP4-212ENST00000493551 DIP2BQ9P265 1576 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 WRNQ14191 1432 aaPredicted RBP eCLIP7.72□□□□□ -1.17
CLIP4-212ENST00000493551 DUOXA2Q1HG44 320 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.72□□□□□ -1.17
CLIP4-212ENST00000493551 KIAA1211Q6ZU35 1233 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 KLHL23Q8NBE8 558 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 KCNK4Q9NYG8 393 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 ANGEL1Q9UNK9 670 aaKnown RBP7.72□□□□□ -1.17
CLIP4-212ENST00000493551 KCNMB2Q9Y691 235 aa7.72□□□□□ -1.17
CLIP4-212ENST00000493551 ADCY10Q96PN6 1610 aa7.71□□□□□ -1.17
CLIP4-212ENST00000493551 TXNDC11Q6PKC3 985 aa7.71□□□□□ -1.18
CLIP4-212ENST00000493551 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
CLIP4-212ENST00000493551 TREML1Q86YW5 311 aa7.71□□□□□ -1.18
CLIP4-212ENST00000493551 POU5F2Q8N7G0 328 aa7.71□□□□□ -1.18
CLIP4-212ENST00000493551 KCNF1Q9H3M0 494 aa7.71□□□□□ -1.18
CLIP4-212ENST00000493551 TM4SF5O14894 197 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 SART1O43290 800 aaKnown RBP7.7□□□□□ -1.18
CLIP4-212ENST00000493551 C8AP07357 584 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 CDC27P30260 824 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 DPYDQ12882 1025 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 FAM117BQ6P1L5 589 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 NLRP13Q86W25 1043 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 ASIC4Q96FT7 647 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 HIF3AQ9Y2N7 669 aa7.7□□□□□ -1.18
CLIP4-212ENST00000493551 WDR64B1ANS9 1081 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 FSCN2O14926 492 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 SMNDC1O75940 238 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLIP4-212ENST00000493551 BMP3P12645 472 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 PTK7Q13308 1070 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 ANKRD34AQ69YU3 496 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 KRTAP4-2Q9BYR5 136 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 LACRTQ9GZZ8 138 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLIP4-212ENST00000493551 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
CLIP4-212ENST00000493551 ADGRL1O94910 1474 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 HOXA10P31260 410 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-212ENST00000493551 CRTC2Q53ET0 693 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-212ENST00000493551 CEP135Q66GS9 1140 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 GIMAP7Q8NHV1 300 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 SPACA7Q96KW9 195 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 CARD10Q9BWT7 1032 aa7.68□□□□□ -1.18
CLIP4-212ENST00000493551 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-212ENST00000493551 WEE1P30291 646 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 ATP11AP98196 1134 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 CBLL1Q75N03 491 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 OR13H1Q8NG92 308 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 FOXD4L4Q8WXT5 416 aaPredicted RBP7.67□□□□□ -1.18
CLIP4-212ENST00000493551 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
CLIP4-212ENST00000493551 PREPP48147 710 aa7.66□□□□□ -1.18
CLIP4-212ENST00000493551 HYAL2Q12891 473 aa7.66□□□□□ -1.18
CLIP4-212ENST00000493551 ANKMY2Q8IV38 441 aa7.66□□□□□ -1.18
CLIP4-212ENST00000493551 UBASH3BQ8TF42 649 aa7.66□□□□□ -1.18
CLIP4-212ENST00000493551 TFIP11Q9UBB9 837 aaKnown RBP7.66□□□□□ -1.18
CLIP4-212ENST00000493551 HECW2Q9P2P5 1572 aa7.66□□□□□ -1.18
CLIP4-212ENST00000493551 FAM196BA6NMK8 535 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L21D6R901 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 CDC25BP30305 580 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 TOP2BQ02880 1626 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 CPSF6Q16630 551 aaKnown RBP eCLIP7.65□□□□□ -1.18
CLIP4-212ENST00000493551 MSMPQ1L6U9 139 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 ERICH3Q5RHP9 1530 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 ADAMTSL4Q6UY14 1074 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 FBXL18Q96ME1 805 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 RNF208Q9H0X6 261 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 ATG3Q9NT62 314 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms