RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
TNFRSF9-203ENST00000492571 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
TNFRSF9-203ENST00000492571 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
TNFRSF9-203ENST00000492571 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 YDJCA8MPS7 323 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 PSMD14O00487 310 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 DBNDD1Q9H9R9 158 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
TNFRSF9-203ENST00000492571 ANXA1P04083 346 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 RIPK4P57078 832 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 PDIA6Q15084 440 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 CTU1Q7Z7A3 348 aaKnown RBP12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 TRPM7Q96QT4 1865 aa12.72□□□□□ -0.37
TNFRSF9-203ENST00000492571 SHTN1A0MZ66 631 aa12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 FAM155AB1AL88 458 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 SOX10P56693 466 aa12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 KIF4BQ2VIQ3 1234 aa12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
TNFRSF9-203ENST00000492571 ADM5C9JUS6 153 aa12.7□□□□□ -0.38
TNFRSF9-203ENST00000492571 ECE2O60344 883 aa12.7□□□□□ -0.38
TNFRSF9-203ENST00000492571 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
TNFRSF9-203ENST00000492571 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
TNFRSF9-203ENST00000492571 NUP98P52948 1817 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 SLC10A3P09131 477 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 RPS8P62241 208 aaKnown RBP12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 FKBP1BP68106 108 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 DLK2Q6UY11 383 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 CSRNP1Q96S65 589 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
TNFRSF9-203ENST00000492571 GPSM2P81274 684 aa12.68□□□□□ -0.38
TNFRSF9-203ENST00000492571 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
TNFRSF9-203ENST00000492571 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
TNFRSF9-203ENST00000492571 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
TNFRSF9-203ENST00000492571 EGFRP00533 1210 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 AGBL3Q8NEM8 1001 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 CDCA5Q96FF9 252 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
TNFRSF9-203ENST00000492571 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 NF2P35240 595 aa12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 SCARF1Q14162 830 aa12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 HDGFL1Q5TGJ6 251 aa12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 ANGEL2Q5VTE6 544 aaKnown RBP12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 ZNF428Q96B54 188 aa12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
TNFRSF9-203ENST00000492571 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 UFL1O94874 794 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 KCNQ5Q9NR82 932 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
TNFRSF9-203ENST00000492571 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 GCC1Q96CN9 775 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
TNFRSF9-203ENST00000492571 HOXB7P09629 217 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 NUDT7P0C024 238 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 ZNF280AP59817 542 aaPredicted RBP12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 PODNQ7Z5L7 613 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 RASAL3Q86YV0 1011 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 MYOZ2Q9NPC6 264 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
TNFRSF9-203ENST00000492571 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 USP17L3A6NCW0 530 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 USP17L4A6NCW7 530 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 CHL1O00533 1208 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 TBC1D8O95759 1140 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 SREBF2Q12772 1141 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 USP17L1Q7RTZ2 530 aa12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF9-203ENST00000492571 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms