RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 COL4A1P02462 1669 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 ANKRD18BA2A2Z9 1011 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 CSF1RP07333 972 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 USP17L8P0C7I0 530 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 ZNF280AP59817 542 aaPredicted RBP11.12□□□□□ -0.63
NUP50-217ENST00000491860 EXOSC9Q06265 439 aaKnown RBP11.12□□□□□ -0.63
NUP50-217ENST00000491860 G2E3Q7L622 706 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 C2orf69Q8N8R5 385 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
NUP50-217ENST00000491860 ZNF408Q9H9D4 720 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 SAGE1Q9NXZ1 904 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
NUP50-217ENST00000491860 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
NUP50-217ENST00000491860 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 KCNJ4P48050 445 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 HUNKP57058 714 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 FKBP1BP68106 108 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
NUP50-217ENST00000491860 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
NUP50-217ENST00000491860 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 ALDH1L1O75891 902 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 CASP7P55210 303 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
NUP50-217ENST00000491860 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
NUP50-217ENST00000491860 GMLQ99445 158 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 GBA2Q9HCG7 927 aaPredicted RBP11.1□□□□□ -0.63
NUP50-217ENST00000491860 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 HDAC9Q9UKV0 1011 aa11.1□□□□□ -0.63
NUP50-217ENST00000491860 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
NUP50-217ENST00000491860 ZNF804BA4D1E1 1349 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 FAM155AB1AL88 458 aaPredicted RBP11.09□□□□□ -0.63
NUP50-217ENST00000491860 SCARF1Q14162 830 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 RGMBQ6NW40 437 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 GGA3Q9NZ52 723 aa11.09□□□□□ -0.63
NUP50-217ENST00000491860 GRM8O00222 908 aa11.08□□□□□ -0.64
NUP50-217ENST00000491860 CCDC57Q2TAC2 916 aa11.08□□□□□ -0.64
NUP50-217ENST00000491860 TAF7LQ5H9L4 462 aa11.08□□□□□ -0.64
NUP50-217ENST00000491860 ZIC5Q96T25 663 aa11.08□□□□□ -0.64
NUP50-217ENST00000491860 C9orf78Q9NZ63 289 aaPredicted RBP11.08□□□□□ -0.64
NUP50-217ENST00000491860 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 EGFRP00533 1210 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 NF2P35240 595 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 CHRNDQ07001 517 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 DACT2Q5SW24 774 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 ANGEL2Q5VTE6 544 aaKnown RBP11.07□□□□□ -0.64
NUP50-217ENST00000491860 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
NUP50-217ENST00000491860 ZNF804AQ7Z570 1209 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 CDCA5Q96FF9 252 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 PTPRCP08575 1304 aa11.07□□□□□ -0.64
NUP50-217ENST00000491860 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
NUP50-217ENST00000491860 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
NUP50-217ENST00000491860 E9PSI1 815 aa11.06□□□□□ -0.64
NUP50-217ENST00000491860 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
NUP50-217ENST00000491860 PRPF38BQ5VTL8 546 aaKnown RBP11.06□□□□□ -0.64
NUP50-217ENST00000491860 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
NUP50-217ENST00000491860 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
NUP50-217ENST00000491860 COL1A1P02452 1464 aaPredicted RBP11.06□□□□□ -0.64
NUP50-217ENST00000491860 F6X3S4 739 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
NUP50-217ENST00000491860 FOXO4P98177 505 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 SLC4A10Q6U841 1118 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 CD209Q9NNX6 404 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
NUP50-217ENST00000491860 CNNM1Q9NRU3 951 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 ZNF521Q96K83 1311 aa11.05□□□□□ -0.64
NUP50-217ENST00000491860 A0A1B0GUL6 1792 aa11.04□□□□□ -0.64
NUP50-217ENST00000491860 SLC10A3P09131 477 aa11.04□□□□□ -0.64
NUP50-217ENST00000491860 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
NUP50-217ENST00000491860 RNF186Q9NXI6 227 aa11.04□□□□□ -0.64
NUP50-217ENST00000491860 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
NUP50-217ENST00000491860 WNT10BO00744 389 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 MYO1BO43795 1136 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
NUP50-217ENST00000491860 IL1R1P14778 569 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 SOX10P56693 466 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 GTF2IP78347 998 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
NUP50-217ENST00000491860 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 UTYO14607 1347 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
NUP50-217ENST00000491860 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.64
NUP50-217ENST00000491860 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
NUP50-217ENST00000491860 TRPA1O75762 1119 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms