RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 TRIM27P14373 513 aa17.14■□□□□ 0.33
CDK9-204ENST00000491521 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
CDK9-204ENST00000491521 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.33
CDK9-204ENST00000491521 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
CDK9-204ENST00000491521 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
CDK9-204ENST00000491521 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
CDK9-204ENST00000491521 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
CDK9-204ENST00000491521 CSF1RP07333 972 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 VIL1P09327 827 aaKnown RBP17.13■□□□□ 0.33
CDK9-204ENST00000491521 KCNJ4P48050 445 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 CST9Q5W186 159 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
CDK9-204ENST00000491521 RASSF10A6NK89 507 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 GRM8O00222 908 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 KLRK1P26718 216 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 FOXO4P98177 505 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 IFIT5Q13325 482 aaKnown RBP17.12■□□□□ 0.33
CDK9-204ENST00000491521 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 EPHA10Q5JZY3 1008 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
CDK9-204ENST00000491521 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
CDK9-204ENST00000491521 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
CDK9-204ENST00000491521 USP17L3A6NCW0 530 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 USP17L4A6NCW7 530 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 USP17L1Q7RTZ2 530 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 TXNRD3Q86VQ6 643 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
CDK9-204ENST00000491521 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 ANKRD2Q9GZV1 360 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 PSME4Q14997 1843 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
CDK9-204ENST00000491521 TAF5LO75529 589 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 CHRNDQ07001 517 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 CYP4F22Q6NT55 531 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 KRT26Q7Z3Y9 468 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 AIDAQ96BJ3 306 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 DCPSQ96C86 337 aaKnown RBP17.1■□□□□ 0.33
CDK9-204ENST00000491521 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
CDK9-204ENST00000491521 CAPNS2Q96L46 248 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 LEMD3Q9Y2U8 911 aa17.1■□□□□ 0.33
CDK9-204ENST00000491521 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
CDK9-204ENST00000491521 WDR33Q9C0J8 1336 aaKnown RBP17.1■□□□□ 0.33
CDK9-204ENST00000491521 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 SNAP23O00161 211 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 FOXN1O15353 648 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 RLBP1P12271 317 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 CCDC57Q2TAC2 916 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 ITPRIPQ8IWB1 547 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
CDK9-204ENST00000491521 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.32
CDK9-204ENST00000491521 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
CDK9-204ENST00000491521 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
CDK9-204ENST00000491521 GGA3Q9NZ52 723 aa17.08■□□□□ 0.32
CDK9-204ENST00000491521 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.32
CDK9-204ENST00000491521 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
CDK9-204ENST00000491521 SCARF1Q14162 830 aa17.07■□□□□ 0.32
CDK9-204ENST00000491521 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
CDK9-204ENST00000491521 CNNM1Q9NRU3 951 aa17.07■□□□□ 0.32
CDK9-204ENST00000491521 AOC2O75106 756 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 ECE1P42892 770 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
CDK9-204ENST00000491521 TNS4Q8IZW8 715 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 GMLQ99445 158 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 MYOZ2Q9NPC6 264 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 SCAF8Q9UPN6 1271 aaKnown RBP17.06■□□□□ 0.32
CDK9-204ENST00000491521 A0A1B0GUL6 1792 aa17.06■□□□□ 0.32
CDK9-204ENST00000491521 CAPN15O75808 1086 aa17.05■□□□□ 0.32
CDK9-204ENST00000491521 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
CDK9-204ENST00000491521 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
CDK9-204ENST00000491521 DACT2Q5SW24 774 aa17.05■□□□□ 0.32
CDK9-204ENST00000491521 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
CDK9-204ENST00000491521 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
CDK9-204ENST00000491521 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
CDK9-204ENST00000491521 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
CDK9-204ENST00000491521 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
CDK9-204ENST00000491521 GTF2IP78347 998 aa17.04■□□□□ 0.32
CDK9-204ENST00000491521 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
CDK9-204ENST00000491521 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
CDK9-204ENST00000491521 WBP1LQ9NX94 342 aa17.04■□□□□ 0.32
CDK9-204ENST00000491521 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
CDK9-204ENST00000491521 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
CDK9-204ENST00000491521 HUNKP57058 714 aa17.03■□□□□ 0.32
CDK9-204ENST00000491521 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
CDK9-204ENST00000491521 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
CDK9-204ENST00000491521 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
CDK9-204ENST00000491521 KAZALD1Q96I82 304 aa17.03■□□□□ 0.32
CDK9-204ENST00000491521 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
CDK9-204ENST00000491521 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
CDK9-204ENST00000491521 JAG2Q9Y219 1238 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms