RNA–Protein interactions for RNA: ENST00000491442.5

HIVEP3-206, Transcript of human immunodeficiency virus type I enhancer binding protein 3, humanhuman

TSL 1 (best)

Gene HIVEP3, Length 1,731 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIVEP3-206ENST00000491442 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
HIVEP3-206ENST00000491442 M0R2C6 588 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 KCNQ2O43526 872 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 NTSR2O95665 410 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 PDCP20941 246 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 ARID4AP29374 1257 aaPredicted RBP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 LPIN2Q92539 896 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 APPBP2Q92624 585 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 AGXT2Q9BYV1 514 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 CTNNA3Q9UI47 895 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 ZNF652Q9Y2D9 606 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 AKAP11Q9UKA4 1901 aa12.04□□□□□ -0.48
HIVEP3-206ENST00000491442 A0A0G2JS52 829 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 UBAP1LF5GYI3 381 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 MCAMP43121 646 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 EXOSC10Q01780 885 aaKnown RBP12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 CCDC152Q4G0S7 254 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 ILDR1Q86SU0 546 aaPredicted RBP12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 FBXL16Q8N461 479 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 NGLY1Q96IV0 654 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 ATRNO75882 1429 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 CNTNAP4Q9C0A0 1308 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 Q6ZUG5 572 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 NIP7Q9Y221 180 aaKnown RBP eCLIP12.03□□□□□ -0.48
HIVEP3-206ENST00000491442 MYH7P12883 1935 aa12.02□□□□□ -0.48
HIVEP3-206ENST00000491442 SPATA31A6Q5VVP1 1343 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 E7EWF7 191 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 USP48Q86UV5 1035 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 C8orf37Q96NL8 207 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
HIVEP3-206ENST00000491442 FOXP2O15409 715 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 SLC5A1P13866 664 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 ADD2P35612 726 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 UBE3CQ15386 1083 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 CSPP1Q1MSJ5 1256 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 LINC00116Q8NCU8 138 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 MPHOSPH8Q99549 860 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 LLPHQ9BRT6 129 aaKnown RBP12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
HIVEP3-206ENST00000491442 PFKFB2O60825 505 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 PI16Q6UXB8 463 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 KLHL34Q8N239 644 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 SYAP1Q96A49 352 aaPredicted RBP12□□□□□ -0.49
HIVEP3-206ENST00000491442 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 PANK2Q9BZ23 570 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 PUS7LQ9H0K6 701 aaKnown RBP12□□□□□ -0.49
HIVEP3-206ENST00000491442 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
HIVEP3-206ENST00000491442 IGHMBP2P38935 993 aaKnown RBP12□□□□□ -0.49
HIVEP3-206ENST00000491442 PHKA1P46020 1223 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 EVCP57679 992 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 IMMTQ16891 758 aaKnown RBP12□□□□□ -0.49
HIVEP3-206ENST00000491442 BRF1Q92994 677 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 SCN7AQ01118 1682 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 NHSQ6T4R5 1651 aa12□□□□□ -0.49
HIVEP3-206ENST00000491442 GPAA1O43292 621 aa11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 FGAP02671 866 aa11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 UBE2HP62256 183 aa11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 LRSAM1Q6UWE0 723 aa11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 ZNF274Q96GC6 653 aaPredicted RBP11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 PIH1D3Q9NQM4 214 aaKnown RBP11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
HIVEP3-206ENST00000491442 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 TCRBV5S4A2TA0A5A2 114 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 VPS37CA5D8V6 355 aaPredicted RBP11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 FAM177BA6PVY3 158 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 GADD45BO75293 160 aaPredicted RBP11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 STK3Q13188 491 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 SLC10A5Q5PT55 438 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 SLC9C2Q5TAH2 1124 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 TTLL5Q6EMB2 1281 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 HELBQ8NG08 1087 aaPredicted RBP11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 USP21Q9UK80 565 aa11.98□□□□□ -0.49
HIVEP3-206ENST00000491442 DOCK2Q92608 1830 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms