RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
RNF38-209ENST00000491349 CEP126Q9P2H0 1117 aa10.25□□□□□ -0.77
RNF38-209ENST00000491349 LEMD3Q9Y2U8 911 aa10.25□□□□□ -0.77
RNF38-209ENST00000491349 EYA2O00167 538 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 RAB11FIP3O75154 756 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 FKBP4Q02790 459 aaKnown RBP eCLIP10.24□□□□□ -0.77
RNF38-209ENST00000491349 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 SSH3Q8TE77 659 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 KAZALD1Q96I82 304 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 PSMD1Q99460 953 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 ZC3H12CQ9C0D7 883 aaKnown RBP10.24□□□□□ -0.77
RNF38-209ENST00000491349 SIL1Q9H173 461 aa10.24□□□□□ -0.77
RNF38-209ENST00000491349 UFL1O94874 794 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 IFIT1P09914 478 aaKnown RBP10.23□□□□□ -0.77
RNF38-209ENST00000491349 SLC5A1P13866 664 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 IRX6P78412 446 aaPredicted RBP10.23□□□□□ -0.77
RNF38-209ENST00000491349 CHRNDQ07001 517 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 WASHC4Q2M389 1173 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 CAVIN4Q5BKX8 364 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 GORABQ5T7V8 394 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 EXOC6Q8TAG9 804 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
RNF38-209ENST00000491349 MINPP1Q9UNW1 487 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 LRRC37AA6NMS7 1700 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 LTBP3Q9NS15 1303 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 FER1L6Q2WGJ9 1857 aa10.23□□□□□ -0.77
RNF38-209ENST00000491349 PNMA6EA0A0J9YXQ4 647 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 LMNB1P20700 586 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
RNF38-209ENST00000491349 UBE4AQ14139 1066 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 PUM3Q15397 648 aaKnown RBP10.22□□□□□ -0.77
RNF38-209ENST00000491349 ZNF804AQ7Z570 1209 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 NIM1KQ8IY84 436 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 LARGE2Q8N3Y3 721 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 GNL3LQ9NVN8 582 aaKnown RBP10.22□□□□□ -0.77
RNF38-209ENST00000491349 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
RNF38-209ENST00000491349 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 CHD4Q14839 1912 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 PPIP5K2O43314 1243 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 FRAT2O75474 233 aaPredicted RBP10.21□□□□□ -0.77
RNF38-209ENST00000491349 PDE8BO95263 885 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 SEC24BO95487 1268 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 YBX3P16989 372 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNF38-209ENST00000491349 GPSM2P81274 684 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 CLASRPQ8N2M8 674 aaKnown RBP10.21□□□□□ -0.77
RNF38-209ENST00000491349 GCC1Q96CN9 775 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 KIF1BPQ96EK5 621 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
RNF38-209ENST00000491349 ZNF804BA4D1E1 1349 aa10.21□□□□□ -0.78
RNF38-209ENST00000491349 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 RFX5P48382 616 aaPredicted RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 EIF6P56537 245 aaKnown RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 GSE1Q14687 1217 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 LRRC24Q50LG9 513 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 KLHDC4Q8TBB5 520 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 TBC1D16Q8TBP0 767 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 C7orf43Q8WVR3 580 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 LPIN2Q92539 896 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 GPATCH3Q96I76 525 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 LRRCC1Q9C099 1032 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
RNF38-209ENST00000491349 RIPOR2Q9Y4F9 1068 aa10.2□□□□□ -0.78
RNF38-209ENST00000491349 DICER1Q9UPY3 1922 aaKnown RBP10.19□□□□□ -0.78
RNF38-209ENST00000491349 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 TAF5LO75529 589 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 IFIT2P09913 472 aaKnown RBP10.19□□□□□ -0.78
RNF38-209ENST00000491349 HDAC1Q13547 482 aaPredicted RBP10.19□□□□□ -0.78
RNF38-209ENST00000491349 ATP2B3Q16720 1220 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 CCDC158Q5M9N0 1113 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
RNF38-209ENST00000491349 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 NEUROD6Q96NK8 337 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 PUS3Q9BZE2 481 aaKnown RBP10.19□□□□□ -0.78
RNF38-209ENST00000491349 RNF181Q9P0P0 153 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 PCDHB8Q9UN66 801 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 EXOC6BQ9Y2D4 811 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 A0A1B0GUL6 1792 aa10.19□□□□□ -0.78
RNF38-209ENST00000491349 ZC3H4Q9UPT8 1303 aaKnown RBP10.18□□□□□ -0.78
RNF38-209ENST00000491349 APBB1O00213 710 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 KIAA2012Q0VF49 1180 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 TFCP2Q12800 502 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 AOC3Q16853 763 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
RNF38-209ENST00000491349 COA1Q9GZY4 146 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 BCL11AQ9H165 835 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 GPR108Q9NPR9 543 aa10.18□□□□□ -0.78
RNF38-209ENST00000491349 ZNF277Q9NRM2 450 aaPredicted RBP10.18□□□□□ -0.78
RNF38-209ENST00000491349 MYH13Q9UKX3 1938 aa10.17□□□□□ -0.78
RNF38-209ENST00000491349 SBF1O95248 1867 aa10.17□□□□□ -0.78
RNF38-209ENST00000491349 HIBADHP31937 336 aaKnown RBP10.17□□□□□ -0.78
RNF38-209ENST00000491349 RASSF7Q02833 373 aa10.17□□□□□ -0.78
RNF38-209ENST00000491349 TNIP1Q15025 636 aa10.17□□□□□ -0.78
RNF38-209ENST00000491349 C9orf131Q5VYM1 1079 aa10.17□□□□□ -0.78
RNF38-209ENST00000491349 OLFM4Q6UX06 510 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms