RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 USP17L4A6NCW7 530 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 SNAP23O00161 211 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 USP17L1Q7RTZ2 530 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 SAMD7Q7Z3H4 446 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 ARHGAP45Q92619 1136 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 CNNM1Q9NRU3 951 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 TRPM7Q96QT4 1865 aa26.3■■□□□ 1.8
RGPD6-211ENST00000490990 TMEM88BA6NKF7 163 aa26.29■■□□□ 1.8
RGPD6-211ENST00000490990 C15orf52Q6ZUT6 534 aaKnown RBP26.29■■□□□ 1.8
RGPD6-211ENST00000490990 JMYQ8N9B5 988 aa26.29■■□□□ 1.8
RGPD6-211ENST00000490990 EGFRP00533 1210 aa26.28■■□□□ 1.8
RGPD6-211ENST00000490990 GMLQ99445 158 aa26.28■■□□□ 1.8
RGPD6-211ENST00000490990 TBC1D10BQ4KMP7 808 aaPredicted RBP26.27■■□□□ 1.8
RGPD6-211ENST00000490990 PUS3Q9BZE2 481 aaKnown RBP26.27■■□□□ 1.8
RGPD6-211ENST00000490990 ZBED9Q6R2W3 1325 aa26.27■■□□□ 1.8
RGPD6-211ENST00000490990 FMR1Q06787 632 aaKnown RBP eCLIP26.26■■□□□ 1.79
RGPD6-211ENST00000490990 DACT2Q5SW24 774 aa26.26■■□□□ 1.79
RGPD6-211ENST00000490990 TRAF5O00463 557 aa26.25■■□□□ 1.79
RGPD6-211ENST00000490990 BCAR3O75815 825 aa26.25■■□□□ 1.79
RGPD6-211ENST00000490990 ZNF280AP59817 542 aaPredicted RBP26.25■■□□□ 1.79
RGPD6-211ENST00000490990 STRIP1Q5VSL9 837 aa26.25■■□□□ 1.79
RGPD6-211ENST00000490990 RIPOR2Q9Y4F9 1068 aa26.25■■□□□ 1.79
RGPD6-211ENST00000490990 POLR2AP24928 1970 aaKnown RBP26.25■■□□□ 1.79
RGPD6-211ENST00000490990 PLIN1O60240 522 aa26.24■■□□□ 1.79
RGPD6-211ENST00000490990 KIF4BQ2VIQ3 1234 aa26.24■■□□□ 1.79
RGPD6-211ENST00000490990 GLIS2Q9BZE0 524 aaPredicted RBP26.24■■□□□ 1.79
RGPD6-211ENST00000490990 CD209Q9NNX6 404 aa26.24■■□□□ 1.79
RGPD6-211ENST00000490990 UBTFL1P0CB47 393 aaPredicted RBP26.23■■□□□ 1.79
RGPD6-211ENST00000490990 RBM26Q5T8P6 1007 aaKnown RBP26.23■■□□□ 1.79
RGPD6-211ENST00000490990 MKRN1Q9UHC7 482 aaKnown RBP26.23■■□□□ 1.79
RGPD6-211ENST00000490990 CNTNAP1P78357 1384 aa26.22■■□□□ 1.79
RGPD6-211ENST00000490990 MROH5Q6ZUA9 1318 aa26.22■■□□□ 1.79
RGPD6-211ENST00000490990 IPO8O15397 1037 aaKnown RBP26.22■■□□□ 1.79
RGPD6-211ENST00000490990 USP17L8P0C7I0 530 aa26.22■■□□□ 1.79
RGPD6-211ENST00000490990 INTS3Q68E01 1043 aaKnown RBP26.22■■□□□ 1.79
RGPD6-211ENST00000490990 CDC37L1Q7L3B6 337 aa26.22■■□□□ 1.79
RGPD6-211ENST00000490990 MXD3Q9BW11 206 aa26.22■■□□□ 1.79
RGPD6-211ENST00000490990 MYO3BQ8WXR4 1341 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 TRIM27P14373 513 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 UBE4AQ14139 1066 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 LRRC24Q50LG9 513 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 TTLL5Q6EMB2 1281 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 KLHDC4Q8TBB5 520 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 FBXW7Q969H0 707 aa26.21■■□□□ 1.79
RGPD6-211ENST00000490990 IL1R1P14778 569 aa26.2■■□□□ 1.78
RGPD6-211ENST00000490990 RFX5P48382 616 aaPredicted RBP26.2■■□□□ 1.78
RGPD6-211ENST00000490990 CST9Q5W186 159 aa26.2■■□□□ 1.78
RGPD6-211ENST00000490990 ATF7IPQ6VMQ6 1270 aa26.2■■□□□ 1.78
RGPD6-211ENST00000490990 ZNF804AQ7Z570 1209 aa26.2■■□□□ 1.78
RGPD6-211ENST00000490990 GTF2IP78347 998 aa26.19■■□□□ 1.78
RGPD6-211ENST00000490990 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
RGPD6-211ENST00000490990 MEIS3Q99687 375 aa26.19■■□□□ 1.78
RGPD6-211ENST00000490990 MYOZ2Q9NPC6 264 aa26.19■■□□□ 1.78
RGPD6-211ENST00000490990 RASSF10A6NK89 507 aa26.18■■□□□ 1.78
RGPD6-211ENST00000490990 HDAC5Q9UQL6 1122 aa26.18■■□□□ 1.78
RGPD6-211ENST00000490990 TNNQ9UQP3 1299 aa26.18■■□□□ 1.78
RGPD6-211ENST00000490990 PCNTO95613 3336 aa26.17■■□□□ 1.78
RGPD6-211ENST00000490990 USP48Q86UV5 1035 aa26.17■■□□□ 1.78
RGPD6-211ENST00000490990 VGLL2Q8N8G2 317 aa26.17■■□□□ 1.78
RGPD6-211ENST00000490990 ABT1Q9ULW3 272 aaKnown RBP26.17■■□□□ 1.78
RGPD6-211ENST00000490990 LRRFIP2Q9Y608 721 aaKnown RBP26.17■■□□□ 1.78
RGPD6-211ENST00000490990 ASTN2O75129 1339 aaPredicted RBP26.16■■□□□ 1.78
RGPD6-211ENST00000490990 PTPN12Q05209 780 aaKnown RBP26.16■■□□□ 1.78
RGPD6-211ENST00000490990 METTL24Q5JXM2 366 aa26.16■■□□□ 1.78
RGPD6-211ENST00000490990 KRT26Q7Z3Y9 468 aa26.16■■□□□ 1.78
RGPD6-211ENST00000490990 DCPSQ96C86 337 aaKnown RBP26.16■■□□□ 1.78
RGPD6-211ENST00000490990 GGA3Q9NZ52 723 aa26.16■■□□□ 1.78
RGPD6-211ENST00000490990 PDE8BO95263 885 aa26.15■■□□□ 1.78
RGPD6-211ENST00000490990 CELF2O95319 508 aaKnown RBP26.15■■□□□ 1.78
RGPD6-211ENST00000490990 MMP14P50281 582 aa26.15■■□□□ 1.78
RGPD6-211ENST00000490990 SCARF1Q14162 830 aa26.15■■□□□ 1.78
RGPD6-211ENST00000490990 DEFB115Q30KQ5 88 aa26.15■■□□□ 1.78
RGPD6-211ENST00000490990 OGFOD1Q8N543 542 aa26.15■■□□□ 1.78
RGPD6-211ENST00000490990 EYA2O00167 538 aa26.14■■□□□ 1.78
RGPD6-211ENST00000490990 ZKSCAN2Q63HK3 967 aa26.14■■□□□ 1.78
RGPD6-211ENST00000490990 FAM84BQ96KN1 310 aaPredicted RBP26.14■■□□□ 1.78
RGPD6-211ENST00000490990 GNAI3P08754 354 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 GYG1P46976 350 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 VEGFBP49765 207 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 DLK2Q6UY11 383 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 KIAA0825Q8IV33 1275 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 CERS5Q8N5B7 392 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 CLUAP1Q96AJ1 413 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 TLL2Q9Y6L7 1015 aa26.13■■□□□ 1.77
RGPD6-211ENST00000490990 ADM5C9JUS6 153 aa26.12■■□□□ 1.77
RGPD6-211ENST00000490990 HIBADHP31937 336 aaKnown RBP26.12■■□□□ 1.77
RGPD6-211ENST00000490990 FKBP1AP62942 108 aaKnown RBP26.12■■□□□ 1.77
RGPD6-211ENST00000490990 ANGEL2Q5VTE6 544 aaKnown RBP26.12■■□□□ 1.77
RGPD6-211ENST00000490990 TDRD7Q8NHU6 1098 aaKnown RBP26.12■■□□□ 1.77
RGPD6-211ENST00000490990 SASH1O94885 1247 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 ATG9AQ7Z3C6 839 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 SULF1Q8IWU6 871 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 ZNF408Q9H9D4 720 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 FBXO3Q9UK99 471 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 FAM205AQ6ZU69 1335 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 PITPNM2Q9BZ72 1349 aa26.11■■□□□ 1.77
RGPD6-211ENST00000490990 WNT10BO00744 389 aa26.1■■□□□ 1.77
RGPD6-211ENST00000490990 NBPF9Q3BBW0 867 aa26.1■■□□□ 1.77
RGPD6-211ENST00000490990 SAPCD2Q86UD0 394 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms